| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0263 |
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| Symbol | sdhA |
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| ID | 5204536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 309198 |
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| End bp | 311048 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598473 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001279168 |
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| Protein GI | 148652075 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTA GACAAGACAA TACAATTAGT AATATTAAAA CCCTAAATTA TGACTCTGTT
ATCGTTGGCG GTGGCGGCTC AGGTATGCGT GCAGCGCTGC AATTAGCAGA AGGCGGCATG
AAAGTAGCTG TTATTACCAA AGTATTCCCA ACCCGCTCGC ACACCGTTGC AGCTCAAGGT
GGTATTGGGG CAAGCTTAGG TAACATGAGT GATGACAACT GGCACTTCCA CTTTTATGAC
ACCGTAAAAG GGTCAGACTG GTTGGGTGAC CAAGACGCTA TCGAATTTAT GTGCCGTGAA
GCGCCAAAAG TAGTGTATGA GCTTGAGCAC ATGGGTATGC CGTTTGACCG CAACCCAGAT
GGCACGATTT ATCAGCGTCC ATTCGGTGGT CACACTTCAA ACTACGGTGA AAAAGCGGTA
CAACGTGCTT GTGCCGCCGC TGACCGTACT GGCCACGCAT TACTACACAC TCTATATCAA
AAGAACTTAG AAGCGGGTAC TGAGTTTTTC ATCGAATGGA TCGCGCTCGA TCTTATTAAA
GATGAAAAAG GCGACATCAA TGGTGTGGTA GCCATTGAGC AAGAAACCGG CACTGTTGCT
GTATTCCAAG CCACTAATAC CGTATTAGCA ACGGGTGGTG CAGGTCGTAT CTTCTCAGCT
TCTACCAACG CTTACATCAA TACCGGTGAC GGCCTAGGTA TGGCAGTACG TGCTGGTATT
CCATTACAAG ATATGGAATT CTGGCAATTC CACCCCACTG GTGTATTCGG TGCAGGTGTA
CTGCTGACTG AAGGTTGCCG CGGTGAAGGC GCTATCTTAC GTAACAAAGA TGGCGAAGCC
TTCATGGAGC GTTATGCACC AACGGTTAAA GACTTGGCAC CTCGTGACCT CGTATCACGC
TCAATGGACC AAGAGATTAA AGAAGGCCGT GGTTGTGGTC CAAACAAAGA TCACATCGTA
ATGGACATGA CTCACTTAGG TGTTGAGACC ATTATGAAGC GTCTGCCTTC TGTATTCGAG
ATTGGTAAGA ACTTTGCCAA CGTCGACATT ACCAAAGAGC CTATCCCAGT TATCCCAACC
ATCCACTATA TGATGGGCGG TATTCCAACC ACCATTCATG GTCAGGTTAT CGTGCCAGAT
CTTGAAGGTC ATGTGGATGA AGAAGGCCTA TACACAGAAG GCAAAATCGT TAAAGGCTTA
TACGCCATTG GTGAGTGTGC TTGTGTGAGT GTTCACGGTG CCAACCGTTT AGGTACCAAC
TCATTACTTG ACTTGGTGGT ATTCGGCCGT GCTGCGGGCA AACACATCAT TGATAACTTC
GGTAGCTCAG ATCATAACTA CCATCCAATG AACCCACGTG TACTAGACTT CACTGTGGGC
CGTTTGAACA AGCTACAACA GTCAACACAA GGCTATAACG CTCAAGAAGT GGCTGATGAA
ATCCGCGCCC TAATGCAAAA ACACGCCAGT GTATTCCGCA CTCAAGCGTT GATGGATGAA
GGTGTTGAGA AGTTATTGGC TCTAAAAGAT AAAGTAGATA ACATTCATTT GGCAGATAAG
TCGCAAGTGT TCAACACCGC GCGTATTGAA GCCTTAGAAG TTGCTAACCT TTACGAAGTG
GCCAAAGCCA CCATGCTATC AGCGGCTCAG CGTCATGAAT GTCGCGGCGC GCATACCGTG
TTAGATTATG ATCGTCCAGA AGATGATCCA ATCGCACCAA ACGGCCGTAA CGATAACGAG
TGGATGAAGC ATACTGTTTG GTATTCAGAA GGCAATAAGA TTGTTTATAA GCCGGTTCGT
AAAGTACCGC TTACTGTTGA TTACGTTGAA CCTAAAGTGC GTGTTTACTA A
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| Protein sequence | MATRQDNTIS NIKTLNYDSV IVGGGGSGMR AALQLAEGGM KVAVITKVFP TRSHTVAAQG
GIGASLGNMS DDNWHFHFYD TVKGSDWLGD QDAIEFMCRE APKVVYELEH MGMPFDRNPD
GTIYQRPFGG HTSNYGEKAV QRACAAADRT GHALLHTLYQ KNLEAGTEFF IEWIALDLIK
DEKGDINGVV AIEQETGTVA VFQATNTVLA TGGAGRIFSA STNAYINTGD GLGMAVRAGI
PLQDMEFWQF HPTGVFGAGV LLTEGCRGEG AILRNKDGEA FMERYAPTVK DLAPRDLVSR
SMDQEIKEGR GCGPNKDHIV MDMTHLGVET IMKRLPSVFE IGKNFANVDI TKEPIPVIPT
IHYMMGGIPT TIHGQVIVPD LEGHVDEEGL YTEGKIVKGL YAIGECACVS VHGANRLGTN
SLLDLVVFGR AAGKHIIDNF GSSDHNYHPM NPRVLDFTVG RLNKLQQSTQ GYNAQEVADE
IRALMQKHAS VFRTQALMDE GVEKLLALKD KVDNIHLADK SQVFNTARIE ALEVANLYEV
AKATMLSAAQ RHECRGAHTV LDYDRPEDDP IAPNGRNDNE WMKHTVWYSE GNKIVYKPVR
KVPLTVDYVE PKVRVY
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