Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0253 |
Symbol | |
ID | 5205015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 295631 |
End bp | 296734 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640598463 |
Product | polysaccharide export protein |
Protein accession | YP_001279158 |
Protein GI | 148652065 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.138137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000559198 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATGTTT TAAAAAGCCC AAAATCACTG TTTGCCAGTA CCTCTCTTGC GGTGTTGATA GGCTTAACTT CAGGCTGTGC CAGCGTCAAC TCAGGCTTGC AAGCAGGTGA GCTGCCACCA CAAGGTGTCT TTATCGCTGA AAACGGCATG CAGTTTAACG TTCAGCCTTT AAGCTTAGCT GGCTTACCCG CTTCACCTGT TTATTCAAGT AGACGTAATA GCGGCTCTAG CATGAAGAAT GCTCGCGTAC ATGAGCTATT AAATGGACCA CGCAGTAGCG AATATCGTCT AGCACAAGGG GATGTACTTA CCATCTCGTT GGGTGATTAC CCTCAAATTC CAAAATCTGA TATTGGCTAC CCTATAGATC AGCAAGGCTA TATCCAGTTT CCCTTGGTAG GTCGAGTAAA GGCCAGCGGG CTTTCTGTAC CTCAGTTTAC CAGTCAATTA CGCAACCAGT TACAACGCTA TTTAAAATAT CCTGATCCAC AGGTTCAAGT TTTAAAATAT CGTAGTAATA ACTTCTTTAT TGATGGCGCT GTAAAGCAAT CAGGTGAGTT CAGTATGGAT GATAGACCTG TATCTTTATA TGGCGCTATT TCAATGGCTG GAGGTGTTGC GCCTGAAGGT GATTCAAACA ATGTTACTTT AACTCGTAAC GGTACCACTT ATGAGCTTGG CTTGAATGAC CTAAAAAGTA TGGGGGTTTC TGCGAATCAA ATCTATCTAA GAGACGGCGA TGCTGTGCAT GTCAATAGTC GTGATCGTAA TAAAGTCTAC GTATTAGGCG AGTTTGGCAG CGTCAAACCT GTAGAGATAC CAGACCAAGG GTTAAGCCTG ACTCAAGTCT TAGGTGAAGT AGAAGGTCTA GATGCCCATA CTGCGGATGC TGCCAAGCTT TATGTGATAC GTGATCACGG CAATGCTTCG TATACGGATA TTTATCATGC CAATCTACAA TCTGTTACTA ACTTAGCATT AGCCAACCGC TTTGAAATGC AGCCCAATGA TATCGTCTAT GTAGACCCTA CAGGTCTAAC CCGATGGTCA AGATTTATTG GTGCTATCCT TCCTTCAGCC TATGCTCTTG ATAGACTTAA CTAA
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Protein sequence | MNVLKSPKSL FASTSLAVLI GLTSGCASVN SGLQAGELPP QGVFIAENGM QFNVQPLSLA GLPASPVYSS RRNSGSSMKN ARVHELLNGP RSSEYRLAQG DVLTISLGDY PQIPKSDIGY PIDQQGYIQF PLVGRVKASG LSVPQFTSQL RNQLQRYLKY PDPQVQVLKY RSNNFFIDGA VKQSGEFSMD DRPVSLYGAI SMAGGVAPEG DSNNVTLTRN GTTYELGLND LKSMGVSANQ IYLRDGDAVH VNSRDRNKVY VLGEFGSVKP VEIPDQGLSL TQVLGEVEGL DAHTADAAKL YVIRDHGNAS YTDIYHANLQ SVTNLALANR FEMQPNDIVY VDPTGLTRWS RFIGAILPSA YALDRLN
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