| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0253 |
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| Symbol | |
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| ID | 5205015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 295631 |
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| End bp | 296734 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640598463 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001279158 |
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| Protein GI | 148652065 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.138137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000559198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATGTTT TAAAAAGCCC AAAATCACTG TTTGCCAGTA CCTCTCTTGC GGTGTTGATA
GGCTTAACTT CAGGCTGTGC CAGCGTCAAC TCAGGCTTGC AAGCAGGTGA GCTGCCACCA
CAAGGTGTCT TTATCGCTGA AAACGGCATG CAGTTTAACG TTCAGCCTTT AAGCTTAGCT
GGCTTACCCG CTTCACCTGT TTATTCAAGT AGACGTAATA GCGGCTCTAG CATGAAGAAT
GCTCGCGTAC ATGAGCTATT AAATGGACCA CGCAGTAGCG AATATCGTCT AGCACAAGGG
GATGTACTTA CCATCTCGTT GGGTGATTAC CCTCAAATTC CAAAATCTGA TATTGGCTAC
CCTATAGATC AGCAAGGCTA TATCCAGTTT CCCTTGGTAG GTCGAGTAAA GGCCAGCGGG
CTTTCTGTAC CTCAGTTTAC CAGTCAATTA CGCAACCAGT TACAACGCTA TTTAAAATAT
CCTGATCCAC AGGTTCAAGT TTTAAAATAT CGTAGTAATA ACTTCTTTAT TGATGGCGCT
GTAAAGCAAT CAGGTGAGTT CAGTATGGAT GATAGACCTG TATCTTTATA TGGCGCTATT
TCAATGGCTG GAGGTGTTGC GCCTGAAGGT GATTCAAACA ATGTTACTTT AACTCGTAAC
GGTACCACTT ATGAGCTTGG CTTGAATGAC CTAAAAAGTA TGGGGGTTTC TGCGAATCAA
ATCTATCTAA GAGACGGCGA TGCTGTGCAT GTCAATAGTC GTGATCGTAA TAAAGTCTAC
GTATTAGGCG AGTTTGGCAG CGTCAAACCT GTAGAGATAC CAGACCAAGG GTTAAGCCTG
ACTCAAGTCT TAGGTGAAGT AGAAGGTCTA GATGCCCATA CTGCGGATGC TGCCAAGCTT
TATGTGATAC GTGATCACGG CAATGCTTCG TATACGGATA TTTATCATGC CAATCTACAA
TCTGTTACTA ACTTAGCATT AGCCAACCGC TTTGAAATGC AGCCCAATGA TATCGTCTAT
GTAGACCCTA CAGGTCTAAC CCGATGGTCA AGATTTATTG GTGCTATCCT TCCTTCAGCC
TATGCTCTTG ATAGACTTAA CTAA
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| Protein sequence | MNVLKSPKSL FASTSLAVLI GLTSGCASVN SGLQAGELPP QGVFIAENGM QFNVQPLSLA
GLPASPVYSS RRNSGSSMKN ARVHELLNGP RSSEYRLAQG DVLTISLGDY PQIPKSDIGY
PIDQQGYIQF PLVGRVKASG LSVPQFTSQL RNQLQRYLKY PDPQVQVLKY RSNNFFIDGA
VKQSGEFSMD DRPVSLYGAI SMAGGVAPEG DSNNVTLTRN GTTYELGLND LKSMGVSANQ
IYLRDGDAVH VNSRDRNKVY VLGEFGSVKP VEIPDQGLSL TQVLGEVEGL DAHTADAAKL
YVIRDHGNAS YTDIYHANLQ SVTNLALANR FEMQPNDIVY VDPTGLTRWS RFIGAILPSA
YALDRLN
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