| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0229 |
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| Symbol | |
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| ID | 5205286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 270520 |
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| End bp | 272040 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640598443 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001279138 |
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| Protein GI | 148652045 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases
[COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.287512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TAGTAACCGG TGCCAATGGT TTTATTGGTG AAGCACTAGT TTCAAGCTTA
CTTCAAACAT CATATAAGCC TATTGCTTGT GTGCGATGGT CTGTTAAGCC TGTTCTAGAC
TGTGAATATC GTTTTATAGA TAAACTTGAC TCTACAACAG ACTGGCATGA TGCACTAAAA
GATATTGATG TTGTCATTCA CTGTGCTGCC AAGGCAAGTA TTACAAAACA AGAAGCAAAT
AATCCTGCCT ATTCTTTAAA AGAAGTGAAT ACATTAGCAA CACTTAATTT AGCACAACAA
GCTGTAGAAG CTGGTGTAAA AAGATTTATA TTCCTAAGCT CCATTAAAGT AAATGGAGAA
TATAGCTTAC CGAACCAGCC ATTTACACCA GAAGTTACGC AATCCCCTAC TGATCCTTAT
GGCTTAAGTA AGTATGAGGC AGAAATTGGA CTACAAAAAA TTGCTGATAA CAGCAATATG
GACTATGTCA TAGTACGCCC GACTCTAGTC TATGGTAATA AAGTGAAGGG TAATTTCCGC
TCCTTAATAA AATGGACCTA TAAAGGAATT CCCTTACCTT TAGCTGGTAT TAAAAACAAC
TTACGCAGCT TAGTTTCTGT TGAAAACTTA ACTGATTTTA TTATTAGTAG TATTGATAAT
CCAAATGCTA AAAATGACGT ATTTTTAGTA TCTGATGGAA CTGATCTCTC AACAGCTGCC
TTATTAAACA ATATTGCAAT AGGATTAGGT GTCAAAAATA GAGCGTTACC TATCCCTCCA
CTGCTTATCA AAACTGGGGC TCGATTAGTA GGTAAAGAAC ATATCGCACA AAGACTATGT
GGTTCATTGC AAGTCGATAT TTCAAAGACA GAAAACACAC TCAATTGGCA ACCTAAAGTA
TCTACCGAGG AGGCCGTACA ACGAACGGCG AAGTACTATG TCTCAAGCTT TTCCAATTTA
AAAAAAAATA GTTGGCAAAG ACCTTTAGAT ATCGCCTTCT CTGCCGCAGG TTTAGTGGCT
ACTTCACCAC TACTGATAGG CACCACTATT GTAGGTTACT TTGACACAGG ATCGCCTTTG
TTTATCCAAG AGCGGGTTGG TAAAGATAAA AAGCCATTTA AACTGGTTAA GTTCCGCACC
ATGAGCTTGG ATACCGCTTC TGTTGCCAGT CATTTAGCAG ATAACAGCTC AATTACCAAG
CTAGGACGCA TTTTACGCAA AACAAAGTTA GATGAACTAC CACAGTTAAT TAATGTCCTA
AAAGGTGAAA TGAGCTTAGT TGGCCCAAGA CCTAATTTAT TCAATCAAGA GGAATTGATT
GAAGCGAGAA GCCAACAAGG CGTATATGAT GTCTTACCTG GTATTACAGG ATTAGCTCAG
CTGAGTGGCA TAGATATGTC TACACCAGAT CTCCTCGCCA AAACCGATAA AGAAATGATT
GATAGCTTAA CCTTACAAAA ATACTTTAGC TATATTATAC GTACTGCCCT AGGCAAAGGC
AGTGGTGATG CGGTTAAGTA A
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| Protein sequence | MNILVTGANG FIGEALVSSL LQTSYKPIAC VRWSVKPVLD CEYRFIDKLD STTDWHDALK
DIDVVIHCAA KASITKQEAN NPAYSLKEVN TLATLNLAQQ AVEAGVKRFI FLSSIKVNGE
YSLPNQPFTP EVTQSPTDPY GLSKYEAEIG LQKIADNSNM DYVIVRPTLV YGNKVKGNFR
SLIKWTYKGI PLPLAGIKNN LRSLVSVENL TDFIISSIDN PNAKNDVFLV SDGTDLSTAA
LLNNIAIGLG VKNRALPIPP LLIKTGARLV GKEHIAQRLC GSLQVDISKT ENTLNWQPKV
STEEAVQRTA KYYVSSFSNL KKNSWQRPLD IAFSAAGLVA TSPLLIGTTI VGYFDTGSPL
FIQERVGKDK KPFKLVKFRT MSLDTASVAS HLADNSSITK LGRILRKTKL DELPQLINVL
KGEMSLVGPR PNLFNQEELI EARSQQGVYD VLPGITGLAQ LSGIDMSTPD LLAKTDKEMI
DSLTLQKYFS YIIRTALGKG SGDAVK
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