| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0202 |
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| Symbol | trmD |
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| ID | 5204786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 238761 |
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| End bp | 239522 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598414 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001279111 |
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| Protein GI | 148652018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00555399 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.115012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATTTCG CTGTCATCAC CATTTTACCT GAGATGTTTA CCGCGATAAG TGAGTATGGC
ATCACCGGTA GAGCGGTTCA AAATAAGCAA GTGGTTATCG ACTGCATAAA TCCTCGCGAT
TTTACGACAG ACAATTATCG CCGTATCGAT GAGCGCCCTT TTGGTGGTGG TCCGGGTATG
GTGATGATGG CAGAACCTTT GGCAAAAGCC ATAGCGTATG CCAAGTCGCA AGCAAGCTTA
CACGGCTGTA TCACAGATTC AGAGCACTGT CCGGTTGTCT ATCTGTCTCC GCAAGGCGAT
AAATTAGATG AAGCTGCAGT GGTTTCTATG CGTCATTATG AGGCTATGAT TCTGTTGTGT
GGTCGCTATG AAGGCATTGA TGAGCGACTG TTAGCGCGTT ATGTTGATAT GGAGATCTCT
ATTGGAGATT TTGTATTGAC CGGTGGTGAG CTACCTGCGA TGGTATTGAT GGACAGTGTC
ATACGCCGAT TGCCCGATGT TATGGGTGAT GCAAAGTCGG CTGAGCAAGA CTCCTTTGTT
GAAGGGTTGC TAGATTGTCC GCACTATACC AAGCCTCATG ACTTTGAGGG GCTACAAGTG
CCAGAGGTGT TATTATCTGG ACACCATGCC AATATCGCAA CGTGGCGGTT TATGCAGCAA
GTTGAGCGCA CCAAACAAAG GCGTCCTGAC TTGTGGCAAT CCTTTACCCC AAACGCCGAG
CAAGCCCGCT TGCTCAAAAA AGTTAACAAA ACGATGAAGT AG
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| Protein sequence | MYFAVITILP EMFTAISEYG ITGRAVQNKQ VVIDCINPRD FTTDNYRRID ERPFGGGPGM
VMMAEPLAKA IAYAKSQASL HGCITDSEHC PVVYLSPQGD KLDEAAVVSM RHYEAMILLC
GRYEGIDERL LARYVDMEIS IGDFVLTGGE LPAMVLMDSV IRRLPDVMGD AKSAEQDSFV
EGLLDCPHYT KPHDFEGLQV PEVLLSGHHA NIATWRFMQQ VERTKQRRPD LWQSFTPNAE
QARLLKKVNK TMK
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