Gene PsycPRwf_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0193 
Symbol 
ID5206315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp228611 
End bp230038 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content46% 
IMG OID640598405 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_001279102 
Protein GI148652009 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.196024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0120657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCG GTCGTATAGT ACAAATTATT GGCGCAGTTA TTGACGTCGA GTTTAACCGC 
ACTGACGTGC CTCAAGTATA TGATGCATTA GTCGTTGATG GTACTGATAC CACACTAGAA
GTTCAGCAAC AGCTGGGTGA CGGTGTTGTA CGTACCATTG CAATGGGATC GACAGAAGGT
CTTAAACGCG GTCTACCAGT AACCAATACT GGTGCCCCTA TTACCGTACC TGTGGGTGAA
GCCACCTTAG GTCGTATTAT GGACGTATTG GGTCGCCCCA TTGATGAACA AGGCCCAGTT
AATTCTGAAG ACAAGTGGTC TATCCACCGT CAAGCGCCAT CATATGATGA GCAAGCTAAC
AGCACTGACC TTTTAGAAAC GGGTATCAAA GTAATTGACT TACTTTGTCC GTTCGCTAAA
GGTGGTAAAG TTGGTCTGTT CGGTGGTGCC GGTGTTGGTA AAACCGTAAA CATGATGGAA
TTAATTAACA ACATCGCGCT TAAGCACTCA GGTCTATCAG TATTCGCTGG TGTGGGTGAG
CGTACTCGTG AAGGTAACGA CTTCTACCAC GAGATGCAAG AAGCGGGCGT TGTTGATGTT
GAAAACTTCA CCAACTCTAA AGTTGCGATG GTTTACGGTC AGATGAATGA GCCACCAGGT
AACCGTCTAC GTGTTGCACT AACTGGTCTA ACCATGGCTG AATACTTCCG TGATCAAAAA
GATGAAAACG GTAAAGGTAA AGACGTTCTA TTATTCGTTG ATAACATCTA CCGCTACACA
CTAGCCGGTA CTGAAGTATC AGCACTATTA GGTCGTATGC CATCAGCGGT AGGTTATCAG
CCGACACTAG CTGAAGAGAT GGGTGTACTA CAAGAGCGTA TTACATCAAC TCAAACGGGT
TCTATTACCT CTATCCAAGC GGTATACGTA CCTGCGGATG ACTTGACCGA TCCATCACCA
GCAACGACGT TCGCTCACTT AGACGCGACA GTAGTACTAA GCCGTGATAT CGCCTCTCAA
GGTATTTACC CTGCGATTGA TCCACTAGAC TCAACTTCTC GTCAGCTAGA TCCACTGGTT
ATCGGTGAAG AGCACTATAA CGTTGCTCGT GGTGTTCAGG AAGTTCTACA GCGCTATAAA
GAGCTTAAAG ACATCATCGC CATTCTTGGT ATGGATGAGC TTTCAGAAGA TGACAAAATG
GTGGTATACC GCGCTCGTAA GATCCAGCGC TTCTTATCAC AGCCGTTCCA CGTGGCAGAA
GTATTCACCG GCGCACCTGG TAAATATGTC ACGCTACGTG AAACCATCTC AAGCTTCCGT
GATATCTTAG ACGGTAAGTA TGATAACCTT CCAGAACAAG CGTTCTACAT GGCAGGTGGC
ATCGATGAAG TGGTTGCTAA AGCTGAGAAA ATGAAGTCTG CAGCTTAA
 
Protein sequence
MSSGRIVQII GAVIDVEFNR TDVPQVYDAL VVDGTDTTLE VQQQLGDGVV RTIAMGSTEG 
LKRGLPVTNT GAPITVPVGE ATLGRIMDVL GRPIDEQGPV NSEDKWSIHR QAPSYDEQAN
STDLLETGIK VIDLLCPFAK GGKVGLFGGA GVGKTVNMME LINNIALKHS GLSVFAGVGE
RTREGNDFYH EMQEAGVVDV ENFTNSKVAM VYGQMNEPPG NRLRVALTGL TMAEYFRDQK
DENGKGKDVL LFVDNIYRYT LAGTEVSALL GRMPSAVGYQ PTLAEEMGVL QERITSTQTG
SITSIQAVYV PADDLTDPSP ATTFAHLDAT VVLSRDIASQ GIYPAIDPLD STSRQLDPLV
IGEEHYNVAR GVQEVLQRYK ELKDIIAILG MDELSEDDKM VVYRARKIQR FLSQPFHVAE
VFTGAPGKYV TLRETISSFR DILDGKYDNL PEQAFYMAGG IDEVVAKAEK MKSAA