Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0193 |
Symbol | |
ID | 5206315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 228611 |
End bp | 230038 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640598405 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001279102 |
Protein GI | 148652009 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.196024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0120657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCG GTCGTATAGT ACAAATTATT GGCGCAGTTA TTGACGTCGA GTTTAACCGC ACTGACGTGC CTCAAGTATA TGATGCATTA GTCGTTGATG GTACTGATAC CACACTAGAA GTTCAGCAAC AGCTGGGTGA CGGTGTTGTA CGTACCATTG CAATGGGATC GACAGAAGGT CTTAAACGCG GTCTACCAGT AACCAATACT GGTGCCCCTA TTACCGTACC TGTGGGTGAA GCCACCTTAG GTCGTATTAT GGACGTATTG GGTCGCCCCA TTGATGAACA AGGCCCAGTT AATTCTGAAG ACAAGTGGTC TATCCACCGT CAAGCGCCAT CATATGATGA GCAAGCTAAC AGCACTGACC TTTTAGAAAC GGGTATCAAA GTAATTGACT TACTTTGTCC GTTCGCTAAA GGTGGTAAAG TTGGTCTGTT CGGTGGTGCC GGTGTTGGTA AAACCGTAAA CATGATGGAA TTAATTAACA ACATCGCGCT TAAGCACTCA GGTCTATCAG TATTCGCTGG TGTGGGTGAG CGTACTCGTG AAGGTAACGA CTTCTACCAC GAGATGCAAG AAGCGGGCGT TGTTGATGTT GAAAACTTCA CCAACTCTAA AGTTGCGATG GTTTACGGTC AGATGAATGA GCCACCAGGT AACCGTCTAC GTGTTGCACT AACTGGTCTA ACCATGGCTG AATACTTCCG TGATCAAAAA GATGAAAACG GTAAAGGTAA AGACGTTCTA TTATTCGTTG ATAACATCTA CCGCTACACA CTAGCCGGTA CTGAAGTATC AGCACTATTA GGTCGTATGC CATCAGCGGT AGGTTATCAG CCGACACTAG CTGAAGAGAT GGGTGTACTA CAAGAGCGTA TTACATCAAC TCAAACGGGT TCTATTACCT CTATCCAAGC GGTATACGTA CCTGCGGATG ACTTGACCGA TCCATCACCA GCAACGACGT TCGCTCACTT AGACGCGACA GTAGTACTAA GCCGTGATAT CGCCTCTCAA GGTATTTACC CTGCGATTGA TCCACTAGAC TCAACTTCTC GTCAGCTAGA TCCACTGGTT ATCGGTGAAG AGCACTATAA CGTTGCTCGT GGTGTTCAGG AAGTTCTACA GCGCTATAAA GAGCTTAAAG ACATCATCGC CATTCTTGGT ATGGATGAGC TTTCAGAAGA TGACAAAATG GTGGTATACC GCGCTCGTAA GATCCAGCGC TTCTTATCAC AGCCGTTCCA CGTGGCAGAA GTATTCACCG GCGCACCTGG TAAATATGTC ACGCTACGTG AAACCATCTC AAGCTTCCGT GATATCTTAG ACGGTAAGTA TGATAACCTT CCAGAACAAG CGTTCTACAT GGCAGGTGGC ATCGATGAAG TGGTTGCTAA AGCTGAGAAA ATGAAGTCTG CAGCTTAA
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Protein sequence | MSSGRIVQII GAVIDVEFNR TDVPQVYDAL VVDGTDTTLE VQQQLGDGVV RTIAMGSTEG LKRGLPVTNT GAPITVPVGE ATLGRIMDVL GRPIDEQGPV NSEDKWSIHR QAPSYDEQAN STDLLETGIK VIDLLCPFAK GGKVGLFGGA GVGKTVNMME LINNIALKHS GLSVFAGVGE RTREGNDFYH EMQEAGVVDV ENFTNSKVAM VYGQMNEPPG NRLRVALTGL TMAEYFRDQK DENGKGKDVL LFVDNIYRYT LAGTEVSALL GRMPSAVGYQ PTLAEEMGVL QERITSTQTG SITSIQAVYV PADDLTDPSP ATTFAHLDAT VVLSRDIASQ GIYPAIDPLD STSRQLDPLV IGEEHYNVAR GVQEVLQRYK ELKDIIAILG MDELSEDDKM VVYRARKIQR FLSQPFHVAE VFTGAPGKYV TLRETISSFR DILDGKYDNL PEQAFYMAGG IDEVVAKAEK MKSAA
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