Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0182 |
Symbol | |
ID | 5205965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 218419 |
End bp | 219213 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640598394 |
Product | ABC-3 protein |
Protein accession | YP_001279091 |
Protein GI | 148651998 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0759014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00115812 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTAACTG AATGGCTTGA TATCATTGCG CCTGCTTGGA TTGCTGGCAG CTTATTGGCC TTATTATCGG CGCCTTTGGG CTGCTTGGTA TTGTGGCGGC GTATGTCGTT TTTTGCTGAT GCGCTCGCTC ACGGTACGTT GTTTGGGGTG GCACTGGCCG CCTTGTGGCA TCTGCCCTTT GGCATAGGGA TTGCTTTGGT CAGTGTGTTG GTGGTGGTCG GCCTATTGTG GCTCGAAGAT GTGCGCCTGC CCAATGATGC GCTACTAGCT GTCGTCTCGG TAACCTTATT GTGTCTGGGA CTACTCACCT TAACGCAGCT AACCCAGATG CAATCTAATG TGCTCAGTTA TTTATTTGGC AACCTGCTTG AGGTAAGCTG GACTGATTTA CCATTATTGT CGGCCTGTGT CGGCGTGGGT ATTGTTGTTT TGGCTGTGAT TTGGCGCCCG CAAGTGATTT TGGCCACCCA TCCAGATTTG GCACAAGTGG CGGGTATTAA AGCCACCCGT CAGCGCTTGT TTTTTATGGG CGTGTTGGCC GGATTTTGTG CGCTGGCGCT CCAAGCGGTG GGCAGCTTAT TAATTAGCGG TCTGCTTATT TTACCGGCGC TGACTGCCCG ATTATTCGCC CATTCCCCGA AACAAATGGT GATTATTGCC GTTATCTTGG CACAGCTTGC TGTCACCGGC GGGGTTTGGG GCAGTGTCTT ACTTGATATT CAAACCGGTT TGGCCATTGT ATTGGGATTG GCTTTGGCAT TTTTTGCCGC TTTTGTCGCA TCTCGCGCTC TCTAA
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Protein sequence | MLTEWLDIIA PAWIAGSLLA LLSAPLGCLV LWRRMSFFAD ALAHGTLFGV ALAALWHLPF GIGIALVSVL VVVGLLWLED VRLPNDALLA VVSVTLLCLG LLTLTQLTQM QSNVLSYLFG NLLEVSWTDL PLLSACVGVG IVVLAVIWRP QVILATHPDL AQVAGIKATR QRLFFMGVLA GFCALALQAV GSLLISGLLI LPALTARLFA HSPKQMVIIA VILAQLAVTG GVWGSVLLDI QTGLAIVLGL ALAFFAAFVA SRAL
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