Gene PsycPRwf_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0182 
Symbol 
ID5205965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp218419 
End bp219213 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID640598394 
ProductABC-3 protein 
Protein accessionYP_001279091 
Protein GI148651998 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0759014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00115812 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTAACTG AATGGCTTGA TATCATTGCG CCTGCTTGGA TTGCTGGCAG CTTATTGGCC 
TTATTATCGG CGCCTTTGGG CTGCTTGGTA TTGTGGCGGC GTATGTCGTT TTTTGCTGAT
GCGCTCGCTC ACGGTACGTT GTTTGGGGTG GCACTGGCCG CCTTGTGGCA TCTGCCCTTT
GGCATAGGGA TTGCTTTGGT CAGTGTGTTG GTGGTGGTCG GCCTATTGTG GCTCGAAGAT
GTGCGCCTGC CCAATGATGC GCTACTAGCT GTCGTCTCGG TAACCTTATT GTGTCTGGGA
CTACTCACCT TAACGCAGCT AACCCAGATG CAATCTAATG TGCTCAGTTA TTTATTTGGC
AACCTGCTTG AGGTAAGCTG GACTGATTTA CCATTATTGT CGGCCTGTGT CGGCGTGGGT
ATTGTTGTTT TGGCTGTGAT TTGGCGCCCG CAAGTGATTT TGGCCACCCA TCCAGATTTG
GCACAAGTGG CGGGTATTAA AGCCACCCGT CAGCGCTTGT TTTTTATGGG CGTGTTGGCC
GGATTTTGTG CGCTGGCGCT CCAAGCGGTG GGCAGCTTAT TAATTAGCGG TCTGCTTATT
TTACCGGCGC TGACTGCCCG ATTATTCGCC CATTCCCCGA AACAAATGGT GATTATTGCC
GTTATCTTGG CACAGCTTGC TGTCACCGGC GGGGTTTGGG GCAGTGTCTT ACTTGATATT
CAAACCGGTT TGGCCATTGT ATTGGGATTG GCTTTGGCAT TTTTTGCCGC TTTTGTCGCA
TCTCGCGCTC TCTAA
 
Protein sequence
MLTEWLDIIA PAWIAGSLLA LLSAPLGCLV LWRRMSFFAD ALAHGTLFGV ALAALWHLPF 
GIGIALVSVL VVVGLLWLED VRLPNDALLA VVSVTLLCLG LLTLTQLTQM QSNVLSYLFG
NLLEVSWTDL PLLSACVGVG IVVLAVIWRP QVILATHPDL AQVAGIKATR QRLFFMGVLA
GFCALALQAV GSLLISGLLI LPALTARLFA HSPKQMVIIA VILAQLAVTG GVWGSVLLDI
QTGLAIVLGL ALAFFAAFVA SRAL