| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0167 |
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| Symbol | |
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| ID | 5205688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 200529 |
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| End bp | 201866 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640598379 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001279076 |
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| Protein GI | 148651983 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000010193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATA GCCCCTCTCT ACCTCATCAA ATCGACACTC AGCCCAGCAA AAAGTTGACC
TTATTAAAAA GCACCTTGGC GTTGGTACCC GCCATTATTT TGGCCAGTTG TGCCAGTCAA
GCACCGATAC AGCAAGTGCC CATTCAAAAG CCAGCTCCTG TGATTGTGGT TAAGCCGCAG
CCTACCCCGC AGCCAAAACC CCAGCCTGCG CCGCAGCCAC AAGCTAGCTA TAGCAGCTTC
TCAGAGTGGA AATCAGATTT TAGCCGCCGT GCGATGAGTC AAGGCTATAG CGCTTATGAT
GTCAGCCGTA TTTTAGACTC TGCTCAATTA AACCAACAGG TTATTTCACT GGATTCAAAC
CAAGCAGAAT TCGTTAAAAT GCCTTGGGAT TATGCCGATT CAGCAGTATC GGGCGGCCGA
GTTAGCAGTG GTAAGAGCAA GTTTAATGAG CAAAGAAGCC TATTGTCCCG CCTTGAGTCA
CAATATGGGG TGAATGCAGA AATCATCGCT GCCATTTGGG GCATGGAGTC CTCTTATGGT
GCAGTCACCG GCAACAGCTA TATCCCAAGC TCGCTGGCCA CGCTCGCCTT TGAAGGCCGT
CGCCGTCAGT GGGCTGAAGA TCAGCTATTG GCCTTAATGC AGCTTATCCA GCATGGTGAT
ATCTATCCCT CTCAGCTGAA TGGGTCTTGG GCCGGTGGTA TGGGTCATAC CCAGTTTATC
CCTGGCACTT GGCTGGCCCA AGGCGTAGAT GGTGATGGCG ATGGCCGTCG TAGCCCTTGG
GTTACTGCTG ATGCCTTATC TTCAACGGCC AACTACTTAA GCAACTCAGG CTGGATGCGC
GGCTTATCGC CATTTTATGA AGTGACTTTG CCTGCCTCAT TTGATTACAA GCTGTTGGGG
CAAAAAATGC CCGGTTCAAC GTGGCGCTCT ATGGGCATTA CCCCCATTGA CGGTGCCTAT
TTAGATGCAG GCACGCCATT TGAGATGTGG CTACCTGCCG GTAAAGACGG CCCTGCGCTA
CTATTAAGCC CAAACTTTGA TGTGATTAAA GTGTATAACA ACTCCTCCAA CTATGCGCTG
GGTGTTAGCT TATTGGGCCG CGCCATCAAT GGTCAGCCGG GTATCCAAAA AGCTTGGCCT
CGTTATGAAC AGCCGTTAAC CAGCGCTCAA GTACGCAACT TACAGCAGCG TTTAACCAGT
GCCGGCTATG ACACCAAGGG TATCGACGGT ATCATGGGCA CCAATACCCG TAATGCTTTT
GCCAAATGGC AGGCGGCCAA TGGCCAAACT GCAGATGGCT TTGTCACTCA GCGCAGTGCA
TCCGCTTTAA TCTGGTAA
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| Protein sequence | MLNSPSLPHQ IDTQPSKKLT LLKSTLALVP AIILASCASQ APIQQVPIQK PAPVIVVKPQ
PTPQPKPQPA PQPQASYSSF SEWKSDFSRR AMSQGYSAYD VSRILDSAQL NQQVISLDSN
QAEFVKMPWD YADSAVSGGR VSSGKSKFNE QRSLLSRLES QYGVNAEIIA AIWGMESSYG
AVTGNSYIPS SLATLAFEGR RRQWAEDQLL ALMQLIQHGD IYPSQLNGSW AGGMGHTQFI
PGTWLAQGVD GDGDGRRSPW VTADALSSTA NYLSNSGWMR GLSPFYEVTL PASFDYKLLG
QKMPGSTWRS MGITPIDGAY LDAGTPFEMW LPAGKDGPAL LLSPNFDVIK VYNNSSNYAL
GVSLLGRAIN GQPGIQKAWP RYEQPLTSAQ VRNLQQRLTS AGYDTKGIDG IMGTNTRNAF
AKWQAANGQT ADGFVTQRSA SALIW
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