| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0159 |
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| Symbol | |
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| ID | 5206812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 189456 |
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| End bp | 190490 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598371 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001279068 |
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| Protein GI | 148651975 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG AAGAGATCAT TCAATCAGCG CCTGCTGCTC CGCTCAAAAA AAGCCGAGTT
TCAGGGGTTA TTTTAATCGA TAAGCCGCAA GGTCTGACCT CGCAGCAGGT GGTATCTAAG
GTTAAGTATC TGCTTAAGTC ACCTTTGCAC GACAGCAAAA AAGCCGGTCA TACTGGGACT
CTAGATCCTA TGGCGACCGG CTTATTGCCT GTATGCTTAG GGGAGGCGAC TAAGTTTAGT
CACTACCAGC TTGATGCTGA TAAGGCGTAT CAGGCCACTA TTAAGCTTGG CATACAAACC
GATACTGGAG ATGCAGAAGG GCAGAGCATT GCTACCGCGG CTGTACCTAA GCTAACTGCG
GCTGAGCTAG AGGCTGTGGC GCAGCAGTTT ATGGGAGATA TTAAACAAAT ACCGCCCATG
TATTCTGCGC TAAAAAAAGA CGGAAAAAAA CTGTATGAGT ATGCCCGCGC CGGTATTGAG
ATTGATCGTC CGGCACGGCC TATCACTATT CAAGCAATAA GCTTAACCTT GGGCGCGCAG
TCCGATGAGC TGATTTTAAA TGTCACTTGC TCAAAAGGCA CCTATGTTCG AGTGCTGGGA
GAAGACATTG CCGCAGCGTT AGGCACGCTT GGGCATTTAA CTGCTCTGCG CCGTACTCAA
GTGGGACATT TTGATATTGC CGAAGCAGTA AGTCTTGAGG CGCTTGAGGA TCTATCTCAC
GAGCAGCGCT TGGCTTATTT ATTGGGTATT GATGCCTGTA TCAATGGCAT ACCGACCCTT
GAGGTGTCTG ACAGTCAGTG TGCTCGCCTG CATATGGGGC AACGTCTTAA TATCAAGCCT
CAGCTTGATG AGGACATCAC TAATTATATA CAGGCCATGT TAAGTCAACG GCACAGTGAT
GCAGATGATA GTGGTAAGGA CGAGGCATTA GATTCAGTAG ATATCAAGCT TGTGAACCCT
AAAGGCGAGT TTTTAGGCTT GGGGGCAGTA GAGCTAAATG GCCGCTTACA GCCCAAAAAA
ATGATTCAAC GTTAA
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| Protein sequence | MMTEEIIQSA PAAPLKKSRV SGVILIDKPQ GLTSQQVVSK VKYLLKSPLH DSKKAGHTGT
LDPMATGLLP VCLGEATKFS HYQLDADKAY QATIKLGIQT DTGDAEGQSI ATAAVPKLTA
AELEAVAQQF MGDIKQIPPM YSALKKDGKK LYEYARAGIE IDRPARPITI QAISLTLGAQ
SDELILNVTC SKGTYVRVLG EDIAAALGTL GHLTALRRTQ VGHFDIAEAV SLEALEDLSH
EQRLAYLLGI DACINGIPTL EVSDSQCARL HMGQRLNIKP QLDEDITNYI QAMLSQRHSD
ADDSGKDEAL DSVDIKLVNP KGEFLGLGAV ELNGRLQPKK MIQR
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