Gene PsycPRwf_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0157 
SymbolinfB 
ID5205921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp186097 
End bp188814 
Gene Length2718 bp 
Protein Length905 aa 
Translation table11 
GC content47% 
IMG OID640598369 
Producttranslation initiation factor IF-2 
Protein accessionYP_001279066 
Protein GI148651973 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA AGACCGTCAA AGAATTAGCA GACATGGTAA GCAAGACAGT CAGTGCAGTA 
CAAAAGCAAC TGACTGATGC TGGGCTGCCT GCTCGTGGCG AGGATGACCT GGTCACCGAG
CTTGAGCAAG AACAGTTAGT AGCATTCTTA AAACAATCGC ACGGACAAAA AGAGAAGCGT
CGTATTAGCC TAAAATCTAA AACGACCAGC ACCGCTCGTG TGACTGGCTC CTCGGGCAAG
TCAAAAAGCG TCAATGTAGA AGTGCGTAAG AAAAAAGTAT TTGAAAAGCC AGATCCTAAT
AAACTGGCTG AAGAAATTGC AGCGCGTGAA CAAGCGGCTT TAGAGGCCAA AAAACGCGCC
GAAGAAGAAG CCAAAAAGCG TGAGCAGGTC AAAAAAGAAG CTGAAGAACG TCAAGCAGCA
ACTTTGGCAG CCATGCGTGC CAACTTAGGT GGCGGCTCCT CTTCAAGCGA TAAAAAAGAA
GAGTTATCTA CTGTCGTGGT GAAAAAAGGC AGTAAAGCTG CTGCTGCGGC AAAAGAAGCG
CCTAAGAAGA AAGTGGCTCA GACCAAACCT AAAGTAGAAA CGGCCGCTGA GCGTAAAGCC
CGCGAAACCC GTGAAGCAGA AGAAGAACGT CTACGTCAAA TTGAAGCAGA AACCCGTCGA
AAGCAAGCCG AAGAAGCTCA GAAGAAAACC CTTGAGCAGA TGCGCAAAAT GGCTGGCAAA
TACAGCGACA AAGATCCCGT GGCAGAAGTT CGTAAGGATG AGCCATTGGC CGAAGGTCTG
GTGGGTGAAG CGTTAGAAGA GTCTTTTGAA AAAGAGCGTC GTGAAATTAA ACGTGGATCT
GCCAGCACTG CCACTCGTGG CCGTCGCCGT AAAGGTCAAG AAGAGCGTGA AATTCGCAAC
CGTAAGCATG GTCTAAAATC AAGCCAAGCC TCTCAGCATA AGTTTGAGAA GCCGGTTGAG
AAGATTGTGC ATGATGTAGA AATTGGCGAG CAAATCGTTG TTTCAGACTT AGCGCAGCGC
ATGGCGGTGA AAGCCCGTGA AGTGACTAAG CTGCTGATGA AGATGGGCGA GATTGTCAGT
GCTGACCAAG AGATTGATCA GGCTACGGCC AGCTTAATCG TTGAAGAAAT GGGTCACAAC
CCAATTCCAG TAAGTGATAC CAAGGTTGAA GACGACTTAC AAGAAGCGGT AGAAGAGCGC
CGCAGTAATG TTCAGACACG TCCGCCAGTG GTTACCATTA TGGGTCACGT TGACCATGGT
AAAACCTCAC TGCTTGATAA AATCCGTGAA ACCAAAGTAG CAACGGGTGA AGCCGGTGGT
ATTACCCAGC ATATCGGTGC TTATCACGTT GAGACCGATC GCGGCGTTAT TACTTTCTTA
GACACCCCAG GTCACGCAGC GTTTACCGCC ATGCGTTCAC GTGGTGCTCA AGCGACGGAT
ATCGTTATTT TGGTAGTAGC TGCTGATGAC GGTATGATGC CGCAAACTGA AGAAGCTATT
GACCATGCTC GTGCTTCAGG TACACCGCTA ATTGTTGCTA TTAACAAGAT GGATAAGAGC
ACTGCAGATC CAGATCGCGT ATTAAATGAG TTAACCACCA AAGAAGTGGT TACTGAAGCG
TGGGGCGGTG ATGTGCCTAT GGCGAAAATC TCTGCTAAGA CCGGTGAAGG TATTGATGAG
CTGTTAGAGC TGATTAACCT ACAAGCTGAG CTTATGGAGC TTGAAGCCCC AACAGACGGC
GCCGCTCAAG GTGTGGTTAT TGAATCTCGT CTAGAAAAAG GCCGTGGTGC AGTTGCTTCT
ATCTTAGTTA AGAAAGGAAC TCTAAACCAA GGTGACCTAG TACTTGCTGG TGAATTCTAC
GGTAAAGTAC GTGCGATGAC TGATGAGACC GGCAAACGTG TCAAATCAGC GGGCCCTTCT
ATTCCAGTAG AAATCTTAGG CCTACCAGAT ACACCTGCGG CAGGTAGTGA ATTCTTGGTA
GTCTCTGATG AGAAAAAAGC ACGTGAAGTT GCTGAATTCC GAGCCACTCG TGAGCGTGAG
CGTCAACTTG AGCGTCAAAA CAAAATGCGC CTTGAGAGTA TGTTTGAGCA GATGGGCCAA
GATGACTTGT CATTCTTGAA CATCATCTTA AAAACAGACG TACGCGGTAC ACTAGAAGCG
CTACTTGCGG CCTTAGAAGA TCTGTCAACT GATGAAGTTA AAGTTAAGGT TATCAGCTCA
GGTGTTGGTC CGATTGCTGA GTCTGATGTG ACATTAGCTG AGTCAAGTGA AGCGGTATTA
TTAGGCTTTA ACGTCCGTGC CGATAATGCG GCCAAGCGCA AAGCTGACGA AGCTGGTATC
GATATTCGCT ACTACAGCGT TATCTATGGC CTAATCGATG ATGTTAAAGC GGCAATGAGT
GGTATGTTGT CTCCAGAGCA TCGCGAAAAA ATCTTGGGTA TTGCTGAAGT ACGTGATGTA
TTCCGCTCTA GTAAATTCGG TGCAGCTGCC GGTTGTATGG TGGTTGAAGG TACCATATAC
CGTAACAAGT CTATCCGCGT ATTACGTGAT GACAAAGTGG CCTTTACCGG TCAATTGCAA
TCATTACGTC GCTACAAAGA TGACGTGAAC GAAGTACGCT CTGGTATGGA GTGTGGTCTT
GCGGTTCGCG GCTACGATGT AGAAGTCGGT GATAAGATCG AAGTATTCGA AATCCAAGAA
ATTCAGCGCA CCATCTAA
 
Protein sequence
MADKTVKELA DMVSKTVSAV QKQLTDAGLP ARGEDDLVTE LEQEQLVAFL KQSHGQKEKR 
RISLKSKTTS TARVTGSSGK SKSVNVEVRK KKVFEKPDPN KLAEEIAARE QAALEAKKRA
EEEAKKREQV KKEAEERQAA TLAAMRANLG GGSSSSDKKE ELSTVVVKKG SKAAAAAKEA
PKKKVAQTKP KVETAAERKA RETREAEEER LRQIEAETRR KQAEEAQKKT LEQMRKMAGK
YSDKDPVAEV RKDEPLAEGL VGEALEESFE KERREIKRGS ASTATRGRRR KGQEEREIRN
RKHGLKSSQA SQHKFEKPVE KIVHDVEIGE QIVVSDLAQR MAVKAREVTK LLMKMGEIVS
ADQEIDQATA SLIVEEMGHN PIPVSDTKVE DDLQEAVEER RSNVQTRPPV VTIMGHVDHG
KTSLLDKIRE TKVATGEAGG ITQHIGAYHV ETDRGVITFL DTPGHAAFTA MRSRGAQATD
IVILVVAADD GMMPQTEEAI DHARASGTPL IVAINKMDKS TADPDRVLNE LTTKEVVTEA
WGGDVPMAKI SAKTGEGIDE LLELINLQAE LMELEAPTDG AAQGVVIESR LEKGRGAVAS
ILVKKGTLNQ GDLVLAGEFY GKVRAMTDET GKRVKSAGPS IPVEILGLPD TPAAGSEFLV
VSDEKKAREV AEFRATRERE RQLERQNKMR LESMFEQMGQ DDLSFLNIIL KTDVRGTLEA
LLAALEDLST DEVKVKVISS GVGPIAESDV TLAESSEAVL LGFNVRADNA AKRKADEAGI
DIRYYSVIYG LIDDVKAAMS GMLSPEHREK ILGIAEVRDV FRSSKFGAAA GCMVVEGTIY
RNKSIRVLRD DKVAFTGQLQ SLRRYKDDVN EVRSGMECGL AVRGYDVEVG DKIEVFEIQE
IQRTI