| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0136 |
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| Symbol | |
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| ID | 5206748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 163891 |
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| End bp | 165408 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598347 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001279046 |
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| Protein GI | 148651953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAC GACACCCCGA GAATGGACTA TTTATTTGGA CACCTGAGCA GCTACTTGCC
GCAACGGCTC AACTAAACGG GGAGTGGATA GGGCTTGAAG CGGCAGATTC ATCGAGCTTA
CGTGCCACTC GTATCATCAC CGATACCCGA AAAATCGAAG CAGGTGATAT CTTCCTTGCC
ATTGTCGGTG AGAACTTTGA TGGACACAGC TTTGTGGCGA GTGCCGTGGA GAAGGGCGCT
ATTGCCACTA TTGTCAGTCA GCCGCTATCA GAGGTTAATG TGCCGCAGCT TAAGGTGGAT
GATACTCGAT TGGCTTTTGG TCAAATTGCC GCTTATCGCC GTCAGCAGCA TCCTAATTTA
AAGGTGATCG CGTTAACCGG CTCTAGTGGC AAGACCACTG TCAAAGAAAT GCTGCGTCAT
ATCTTTGCTC AAGTTGAAGC CGCTTCTGCC GATGTGCAAA GCACAACTTT GGTGACCCGA
GGTAATCTCA ATAACGACTT TGGGGTGCCT ATGATGCTGC TAGAATTAGA GCAGCAGCAC
CGTTATGCAG TGCTTGAGCT GGGCGCAAAC CATGTCGGTG AGATTGCTTA TACTGCTGCC
ATGGTCAAGC CAGATGTGGC CTGCATCCTA AATATTGGGA CAGCGCATTT GGGAGAGTTT
GGTGGCCGTG ACAATATCGC CAAGACCAAA GCGGAGATTT ATCAGCCGCT GACGCAAGCA
AGTACGGCAG TTGTGCCTTG TGATGATGAT TATAGCGATC AATTAATGAG CACCGCCAAG
CAGCATACCG ATACCATTAT TGGCTTTGGT TGGCATTCGC TTGAGCAGCG GACGGCAAAG
CTGCCTGCAG TCTATGCTAC TGAGGTTAAA ACCACTGCGC TACAAAGCCG CTTCCAATTA
CACTTTGCTA TTGAGGGCAA AGCACCTGCC ATGGTATCCG TCCTGCTGCC TATGGCCGGC
GAGCACAATG TCAGTAATGC CTTAGCGGCA GCTGCCTGTG CTTACGCCGC TGGCGTGTCG
GCTGAATTAA TTGCGCAAGG TCTAAACCAA GCCAAATCCA GCAAAGGCCG ACTGGGTAGA
CAGCGCTTGG GTCAACATCA CATCATTGAT GATACCTACA ATGCCAACCC CAATTCTATG
CGCGCCGCTG CTGATGTACT GGCGGCTCAA GAAGGCACCA GAATTTTGGT ACTGGGTGAC
ATCGGTGAGC TGGGTGATGA CGCGGTTAGC GAGCATTATA AATTGGGTGA AGCGATTGCT
AACAAAGCGG TGGACTATAT GTTGTGTGCC GGTGAGTTTG CCAAAGACAC GGTAGCTGGA
GCCAGCAGTC AAGGCATGAC ACAGGCATAC TCCTTTGATA CCAAAGCTGA CTTATTGCCC
AAGCTTATTG AGCTGGTTCA GACGCAACAG CAGCAGGGCC AATTGTGTAC CTTATTATTT
AAAGGCTCGC GCACCACCAC GATGGAAACC TTGATTGACG ATTTAACACA AATTAGCACA
AGCCCCTCAT CTCTATAG
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| Protein sequence | MSQRHPENGL FIWTPEQLLA ATAQLNGEWI GLEAADSSSL RATRIITDTR KIEAGDIFLA
IVGENFDGHS FVASAVEKGA IATIVSQPLS EVNVPQLKVD DTRLAFGQIA AYRRQQHPNL
KVIALTGSSG KTTVKEMLRH IFAQVEAASA DVQSTTLVTR GNLNNDFGVP MMLLELEQQH
RYAVLELGAN HVGEIAYTAA MVKPDVACIL NIGTAHLGEF GGRDNIAKTK AEIYQPLTQA
STAVVPCDDD YSDQLMSTAK QHTDTIIGFG WHSLEQRTAK LPAVYATEVK TTALQSRFQL
HFAIEGKAPA MVSVLLPMAG EHNVSNALAA AACAYAAGVS AELIAQGLNQ AKSSKGRLGR
QRLGQHHIID DTYNANPNSM RAAADVLAAQ EGTRILVLGD IGELGDDAVS EHYKLGEAIA
NKAVDYMLCA GEFAKDTVAG ASSQGMTQAY SFDTKADLLP KLIELVQTQQ QQGQLCTLLF
KGSRTTTMET LIDDLTQIST SPSSL
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