Gene PsycPRwf_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0110 
Symbol 
ID5205083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp131560 
End bp132525 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content48% 
IMG OID640598319 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_001279020 
Protein GI148651927 
COG category[R] General function prediction only
[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00667649 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG TTTTTTTAGA CAGAGGCACT TTTTTGGAAG GATTGGCGCT GCCAAAACCT 
CAAGGTATTG ATGAATATCA AACCTTTGAT GAGACGCCCC AAGACGATCA GTTAATCATC
GAGCGCTGCC AAGGGGCGCA GATTATCTTT ACCAATAAGG TAAAAATTAG CGCTGAGGTT
ATCGCCGCTT TGCCGGACCT AAAGCTCATT CAATTAACGG CCACTGGCAT GAACAATGTG
GATGCTGACG CCTGTAAAAA ACAGGGTGTT GAGCTATACA ATGTCGCCGG TTATGCCGTA
AAAAGCGTGC CAGAACATAC CTTTATGTTA ATGTTGGCGG CACTGCGCTC CGGCGTCCAT
TATCACAACA AAGTCATCGA TGGCAGCTGG GAGGCCTCAG GCAACTTCAG CCTGATGGAT
GTGCCATTAA TTGACTTAGA GGATACCACC TTGGGCATTA TCGGTGTCGG CACCATTGGC
AAACGAGTCA CCGAAATTGC CAAAGCCTTT GGCATGACTG TGCTTTGGGC CGAGCATCAA
GGTCAAGCGC CGCGCAATGA TGAGTATACC GACTTTGACA CTGTGCTCGA GACCTCTGAT
GTGATTAGCC TGCACTGTCC ATTGACCGAA AAAACAGCGC ACCTCATTAA CGCTGATACT
TTGGCCAAAA TGAGCAAAAA ACCCTTGGTG GTGAACGTGG CACGCGGCGG AATTGTAGAC
TCAAAAGCCA TAGTTGAAGC GCTAGAGCAA GGTCAAGTAC TGGGCTACGC CACTGATGTG
TTTGAACAAG AGCCGACCAC TCAGGAGGAT CCATTATGGC AATTGGGGCA AAAAAATCAT
CCACGCCTGA TTTTTAGTCC GCACAATGCT TGGGCCAGTA AGGCTGCGCA GCAAAAGCTG
TGGGATATTT TAACCGAACA GGTCAGTGAG TTTATTACCA CACACAAACA CTCAGTGTCA
TCCTAG
 
Protein sequence
MKAVFLDRGT FLEGLALPKP QGIDEYQTFD ETPQDDQLII ERCQGAQIIF TNKVKISAEV 
IAALPDLKLI QLTATGMNNV DADACKKQGV ELYNVAGYAV KSVPEHTFML MLAALRSGVH
YHNKVIDGSW EASGNFSLMD VPLIDLEDTT LGIIGVGTIG KRVTEIAKAF GMTVLWAEHQ
GQAPRNDEYT DFDTVLETSD VISLHCPLTE KTAHLINADT LAKMSKKPLV VNVARGGIVD
SKAIVEALEQ GQVLGYATDV FEQEPTTQED PLWQLGQKNH PRLIFSPHNA WASKAAQQKL
WDILTEQVSE FITTHKHSVS S