Gene PsycPRwf_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0104 
Symbol 
ID5206176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp123847 
End bp125037 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content45% 
IMG OID640598313 
Producthypothetical protein 
Protein accessionYP_001279014 
Protein GI148651921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000484074 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATTGC GAGGTGAAAC ACAAGAAAAC GGAGAGCTGC CAACCTTATC GTTTTCGCGT 
ACCGATGGTA TTGCCTTAAC CAAGAATAAC CGCATCAAAG ACTTAAACAT TCAGGCCGAT
GCCTCACACC GTGCTATTTA TAACATCTTG CAAGAACAAG ATTTGGGCAG CTTTCAATTT
GAAAATCTAA GCCTAGTCGG GCAATTGTCA TTCATCACCC GTCCAGGTAC TAAGTCGGCC
AAGGTCAGCA TTAAAGATGT AGACATTATC GCCTGTGATG CGCGCCATTA CCCAGAGCAG
CCGCAAAAGT ACGGCGTCAA TGTGCTTCAA GGTGCGCTGA CTGTGTATAA CTTTAATAGC
GAAAAAGACA GTCGGATTGA TTTAACGATA GACAATATTA CGATTGGTCG TAAAAATGCC
CCTGTATTAG GCTCAGGCTT ATTTGTTTCA GGCTTTGGTG ATGAGGGTGG TACGGTTGTG
GCTGATCGCA TTACCACCGG TGCGGTGTAT TCAAATGGTA AATTGCCGTT TGGCGTACCC
GATATCATTA CTGCCGCAAT CTTTATTGTC TATGGCGCCA CTGTCAAACA GCTCACCCAT
AATGAGACCA TCGTGACTTA TGGCGTTAGC GATATGGTGT TAGATACTTG GGGACATGTG
GATAACTGGC TGTCAGAAAA AGATGTTATC TCGTACGGCC CAAGCGGTAT AGGATTCGTA
AACTTCGGTA CTGTGGGTAA CTTTGTGGTA AAAGGCGATG TGAAGACTTA TGGTCTAGGG
GCACGTGGTT ATAACCAGTA TGATGGGACA GTGGATAATA TCGAATTTGG CAGCATCGAA
ACCTTCGGCG ATGGCTCAAT TGGTATTCAG TTAAGCCGTA AAATTGGCAA GCTGACTGTG
CACCGTGATG TGATTACCCA CGGTGGTGAA GGCCAGTCAT TGGTGAAAGG GGTATTATCT
ACCCTAAAAG CCATTGGCTT ATCGGTTAAA GAGGGCGGAG AAGCTGAACA AATTAATATC
GGTGGTAATT TAGAGACCCA AGGCAATGAG GTAAATACAG TAGAAGTTAA TAAAGGCGGT
AAAATTCATG CCATACAAGT GGGCGGTGGG ATTGTTGCCA AAGGCGAGAA AAGCAAACGC
CTAGATATCG AAGACGGTGC AGACGTACCT GAGTCTTTAA AAGAGGCTTA A
 
Protein sequence
MILRGETQEN GELPTLSFSR TDGIALTKNN RIKDLNIQAD ASHRAIYNIL QEQDLGSFQF 
ENLSLVGQLS FITRPGTKSA KVSIKDVDII ACDARHYPEQ PQKYGVNVLQ GALTVYNFNS
EKDSRIDLTI DNITIGRKNA PVLGSGLFVS GFGDEGGTVV ADRITTGAVY SNGKLPFGVP
DIITAAIFIV YGATVKQLTH NETIVTYGVS DMVLDTWGHV DNWLSEKDVI SYGPSGIGFV
NFGTVGNFVV KGDVKTYGLG ARGYNQYDGT VDNIEFGSIE TFGDGSIGIQ LSRKIGKLTV
HRDVITHGGE GQSLVKGVLS TLKAIGLSVK EGGEAEQINI GGNLETQGNE VNTVEVNKGG
KIHAIQVGGG IVAKGEKSKR LDIEDGADVP ESLKEA