Gene PsycPRwf_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0093 
Symbol 
ID5204965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp112127 
End bp112927 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content49% 
IMG OID640598302 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001279003 
Protein GI148651910 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA AACTAAATAA CCTAACCATT TGGATTACTG GTGCCTCAAG TGGGCTGGGT 
GAAGCGCTGG CGATAGAATT CGCTCGCCGC GGTGCCACAA TTATATTAAG CGGGCGCAAT
AAACAAAAAC TAGAGGCCGT TAAAGCCAAA TGTAAAAAAC CGACAAAACA CGTCGTGGTG
CCCTTTGATA TCTTAGACGT CGCACAAGCT GAAGCGGCTT ATGCCACCGT TATCCAAAAT
GCGGGACATG TCGATTGGCT GATTAATAAC GCGGGGGTCA GTCAGCGCTC ATTAATTATG
CAGACCAGTG AGGCTGTTGA GCGCCAATTG ATGGAGATCG ATTATTTTGC TCAGACCCGA
CTAACGCGTT TGGTACTACC AGATATGATT GCCCAGGGTG GCGGCAAGGT CGTGATGGTC
TCAAGTGTGG CCGGATTATT AGGTACACAA TATCGCGGTG CTTATGGTGC GGCCAAAGCG
GCCATTCACA TGTGGGCCAA TAGCTTGCGT GCCGAATTAA GTGAGGACAA TATTAAAGTG
GCCACCATAT TCCCAGGCTT TATCCAGACC AACGTCTCCA TCAATGCCCT GACTGCAGAT
GGCAGCGCTC AAGGCACGAT GGATGACGCC ACTGACCAAG GCCTAAGTGC CAAAGCCTTT
GCCAAGCAAG CGGTAAAAGC CTTGGTTCAA GACGAGGAGT ACATTATCGT CGCAGGTCAA
AAAGAGAAGT TTGCCACCTT AGTCAACCGG GTATCACCGC CTAAGCTGTA TAAACTTATC
CGCGGCGCAA AAGTTAAGTA G
 
Protein sequence
MKTKLNNLTI WITGASSGLG EALAIEFARR GATIILSGRN KQKLEAVKAK CKKPTKHVVV 
PFDILDVAQA EAAYATVIQN AGHVDWLINN AGVSQRSLIM QTSEAVERQL MEIDYFAQTR
LTRLVLPDMI AQGGGKVVMV SSVAGLLGTQ YRGAYGAAKA AIHMWANSLR AELSEDNIKV
ATIFPGFIQT NVSINALTAD GSAQGTMDDA TDQGLSAKAF AKQAVKALVQ DEEYIIVAGQ
KEKFATLVNR VSPPKLYKLI RGAKVK