Gene PsycPRwf_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0082 
Symbol 
ID5204652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp100375 
End bp101655 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content51% 
IMG OID640598291 
Producthypothetical protein 
Protein accessionYP_001278992 
Protein GI148651899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCG ATAGCAAACA TCCCCCAACT GATTCACTGT CTTATCAACA AAAGCGGGTA 
GAGCTGCCCA GAGGCACGCT TGACTTAAGC TATCGGCTAA GTGGTGAGCA CAGCTATCAG
CTTGATGACC TGCTGGGATT TGCGCAGCGT ATCAATCCGA AGCGGGCGTT TTTGTTTGTC
TCCAAAGTAC TGGGTCGACA TATTCCGGTA TCGCCCCAGA TCATGCGCCA AGCTTTTAGC
CATTTGGCTC ATACGGTGCC GGATAATTTG CCTGAGCCGA TAGTGGTGGT GGGTATGGCT
GAGACCGCAG TGGGACTGTC AGCAGGCGTG CATCAAGCGT TACAGGCACG TTATCCCAAT
GCGTTGCTGC TCAACTCCAC CCGTCATGCT CAGCAGCAAG CAAGCCTACT GACCACCTTT
AGTGAGGACC ATAGCCATGC GAGCACCCAT CTGATTTATC AAAGCGATGA GCCGCACATA
CAGGCGCAGC TAATGGCCAG TAAGACTTTG ATTATGGTGG ATGATGAAGC CTCAACCGGA
AATACTTGTG TCAATGTGGT CAGTGCCTTA CGAGAGGCGG GGCTCACTGA GCTTGAGCAG
GTACATTTGG TAACTTTGGT GGATTGGTCG TTAGGACAAG CAGACAATGA TGACCATATC
GCTCTTCGCT TAGAAGGGAT AGCCTTTGAG CGTCATCACT TGATGGCTGG CGACTGGCAA
TGGACCGATG CGCCCGATCC ACAGCCGATT ACTATGCCCA GTGTCGATAC CACTGACGCC
GGCAGTCAGC CGCTGTTAGC AACTGGCAAC TGGGGGCGTC AACCTACCTT AGACAGCACC
GAGGGCTTTG CTCATTTTTT AGCACGCTTT AAGCAGGCTT ACCAAAGAGC ACGTGGCATT
GATGTGGTCA GCGATCCGTT TATTAAGGAT AGCGGCACCA CTGATAATGC TCAGTCTACG
CGAATTTTGG TGCTGGGAAG TAATGAGTTT GTGTGGTTGC CTTTTTTGTT GGCAGAGTGG
ATAGAGCAGC AGGCGCTGAC GACATCACAA AGCCGTGCAC AGGTGAGCTT TAGCGCTTTG
ACCCGATCAC CGATTGCTTT GGGCGGTGCC ATTGACGCAG TACTAAGCTT CCAAGATAAT
TATGGCCTAG GTATGACCAA CTTTGTGTAT AACGTGGTCC CTGAGCAGTG GGATATTATT
GTGCTGTGTG TCGAGACACC CACTGAGAGT GTCGATGCGC TGTGGCATAA CTTAGATAAC
GTGATTGTGG TGAGTCCCTA A
 
Protein sequence
MTCDSKHPPT DSLSYQQKRV ELPRGTLDLS YRLSGEHSYQ LDDLLGFAQR INPKRAFLFV 
SKVLGRHIPV SPQIMRQAFS HLAHTVPDNL PEPIVVVGMA ETAVGLSAGV HQALQARYPN
ALLLNSTRHA QQQASLLTTF SEDHSHASTH LIYQSDEPHI QAQLMASKTL IMVDDEASTG
NTCVNVVSAL REAGLTELEQ VHLVTLVDWS LGQADNDDHI ALRLEGIAFE RHHLMAGDWQ
WTDAPDPQPI TMPSVDTTDA GSQPLLATGN WGRQPTLDST EGFAHFLARF KQAYQRARGI
DVVSDPFIKD SGTTDNAQST RILVLGSNEF VWLPFLLAEW IEQQALTTSQ SRAQVSFSAL
TRSPIALGGA IDAVLSFQDN YGLGMTNFVY NVVPEQWDII VLCVETPTES VDALWHNLDN
VIVVSP