Gene PsycPRwf_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0080 
Symbol 
ID5206252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp97552 
End bp98790 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content50% 
IMG OID640598289 
Productstress protein 
Protein accessionYP_001278990 
Protein GI148651897 
COG category[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
[COG4110] Uncharacterized protein involved in stress response 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CTTTAATTGC CGGTGCCAAT GCGCCGCTAC CCACCGATAA TATTAGTGTA 
CGTATTTTAA GTGACCAGCC CATTGATTGC GCTGCCTACC GCTTAGCCGA AACTGGCAAG
GTGCGCGGTG ACGGCGACAT GGTGTTTTAT GGTCAGACCC GCAGCGATGA TGGCAGTGTC
AGCCATCGCG GCCACGATAC TGATGCGTTT TTTGACATCA GCCTACCTAC GCAGCCACAA
ACTATCCAAA AGATTGCTTT GGCTTTTTCA AGCAATCAGC CTTTATCACA ATTGGGCGAT
ATTCAATTGC AAGTGCTCCA AGGTACAACT GTACTGATGA CCTGCCATGT ACAAAGTGCC
AATCGCAGCG AAAAAGCACT TATCTTAGGG GAATGCTATC GCCGCCAAGG CCAATGGAAA
TTTCGATTTA TCTCGCAAGG ATTTGATGGC GGATTGAAGC CACTGTCTGA GCATTTTGGG
GTAGAAATCG CTGATGAGGC GCCTGCACCT AGTCCTGTAG CAACGCCACC GGCTCAGAAC
CGAAGCTCAC AAATGCCGCC CCCTATTAGC GCACCTGCAC CCAGCTCACC TGCGCCGCGC
TCGGTTAATT TATCCAAAAT TAGCCTGACC AAAAATCAAT CCAGTATTAA CCTGAAGAAA
AAAGATGATT TTGGCAAAAT CACCGTCAAC CTAAACTGGA ATCGCCAGAA CGCTAGCGGA
GCTAATACAG CGGTTAAAAA GAAAGGCTTT TTAAACGATT TGTTTGCCGC AAAATCAACC
GGTATAGACC TTGATGTTGG TGCGATGGTG CACCTAAATA ATGGCGAGCG CACCTTAATT
CAGGCACTCG GCGGCCGATT TGGTGATCTT CAAAGAGCGC CTTATGTGTT ACTGCGCGGC
GATGACCGCA CCGGCCAAAG CCTAGACGGT GAATGGCTCG ATATCAATGG TGCCCGCTGG
AGCGATATCA AAGAGGTGTT TATCTTCGCC TTTATCTACG AAGGGGCACC CAACTGGGCG
CAAACCGATG GCACAGTCAC CATTTATGTC CCCGGCCAAC CGCCTATTGA GACGCGGATG
ACGGAGGGCA ATAACGCCTC AGGCATGTGT GCCGTTGCTC GGTTAATGAA CCAAAATGGC
AGTATTAATG TGGAGCGTAT TAACCGCTAT TTCTCCGGCC ATCAGCAGAT GGATGAAGCC
TTTGGTTGGG GCTTTAACTG GAAGCGGGCT CGCAAATAA
 
Protein sequence
MSQTLIAGAN APLPTDNISV RILSDQPIDC AAYRLAETGK VRGDGDMVFY GQTRSDDGSV 
SHRGHDTDAF FDISLPTQPQ TIQKIALAFS SNQPLSQLGD IQLQVLQGTT VLMTCHVQSA
NRSEKALILG ECYRRQGQWK FRFISQGFDG GLKPLSEHFG VEIADEAPAP SPVATPPAQN
RSSQMPPPIS APAPSSPAPR SVNLSKISLT KNQSSINLKK KDDFGKITVN LNWNRQNASG
ANTAVKKKGF LNDLFAAKST GIDLDVGAMV HLNNGERTLI QALGGRFGDL QRAPYVLLRG
DDRTGQSLDG EWLDINGARW SDIKEVFIFA FIYEGAPNWA QTDGTVTIYV PGQPPIETRM
TEGNNASGMC AVARLMNQNG SINVERINRY FSGHQQMDEA FGWGFNWKRA RK