Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0080 |
Symbol | |
ID | 5206252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 97552 |
End bp | 98790 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640598289 |
Product | stress protein |
Protein accession | YP_001278990 |
Protein GI | 148651897 |
COG category | [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 [COG4110] Uncharacterized protein involved in stress response |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAA CTTTAATTGC CGGTGCCAAT GCGCCGCTAC CCACCGATAA TATTAGTGTA CGTATTTTAA GTGACCAGCC CATTGATTGC GCTGCCTACC GCTTAGCCGA AACTGGCAAG GTGCGCGGTG ACGGCGACAT GGTGTTTTAT GGTCAGACCC GCAGCGATGA TGGCAGTGTC AGCCATCGCG GCCACGATAC TGATGCGTTT TTTGACATCA GCCTACCTAC GCAGCCACAA ACTATCCAAA AGATTGCTTT GGCTTTTTCA AGCAATCAGC CTTTATCACA ATTGGGCGAT ATTCAATTGC AAGTGCTCCA AGGTACAACT GTACTGATGA CCTGCCATGT ACAAAGTGCC AATCGCAGCG AAAAAGCACT TATCTTAGGG GAATGCTATC GCCGCCAAGG CCAATGGAAA TTTCGATTTA TCTCGCAAGG ATTTGATGGC GGATTGAAGC CACTGTCTGA GCATTTTGGG GTAGAAATCG CTGATGAGGC GCCTGCACCT AGTCCTGTAG CAACGCCACC GGCTCAGAAC CGAAGCTCAC AAATGCCGCC CCCTATTAGC GCACCTGCAC CCAGCTCACC TGCGCCGCGC TCGGTTAATT TATCCAAAAT TAGCCTGACC AAAAATCAAT CCAGTATTAA CCTGAAGAAA AAAGATGATT TTGGCAAAAT CACCGTCAAC CTAAACTGGA ATCGCCAGAA CGCTAGCGGA GCTAATACAG CGGTTAAAAA GAAAGGCTTT TTAAACGATT TGTTTGCCGC AAAATCAACC GGTATAGACC TTGATGTTGG TGCGATGGTG CACCTAAATA ATGGCGAGCG CACCTTAATT CAGGCACTCG GCGGCCGATT TGGTGATCTT CAAAGAGCGC CTTATGTGTT ACTGCGCGGC GATGACCGCA CCGGCCAAAG CCTAGACGGT GAATGGCTCG ATATCAATGG TGCCCGCTGG AGCGATATCA AAGAGGTGTT TATCTTCGCC TTTATCTACG AAGGGGCACC CAACTGGGCG CAAACCGATG GCACAGTCAC CATTTATGTC CCCGGCCAAC CGCCTATTGA GACGCGGATG ACGGAGGGCA ATAACGCCTC AGGCATGTGT GCCGTTGCTC GGTTAATGAA CCAAAATGGC AGTATTAATG TGGAGCGTAT TAACCGCTAT TTCTCCGGCC ATCAGCAGAT GGATGAAGCC TTTGGTTGGG GCTTTAACTG GAAGCGGGCT CGCAAATAA
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Protein sequence | MSQTLIAGAN APLPTDNISV RILSDQPIDC AAYRLAETGK VRGDGDMVFY GQTRSDDGSV SHRGHDTDAF FDISLPTQPQ TIQKIALAFS SNQPLSQLGD IQLQVLQGTT VLMTCHVQSA NRSEKALILG ECYRRQGQWK FRFISQGFDG GLKPLSEHFG VEIADEAPAP SPVATPPAQN RSSQMPPPIS APAPSSPAPR SVNLSKISLT KNQSSINLKK KDDFGKITVN LNWNRQNASG ANTAVKKKGF LNDLFAAKST GIDLDVGAMV HLNNGERTLI QALGGRFGDL QRAPYVLLRG DDRTGQSLDG EWLDINGARW SDIKEVFIFA FIYEGAPNWA QTDGTVTIYV PGQPPIETRM TEGNNASGMC AVARLMNQNG SINVERINRY FSGHQQMDEA FGWGFNWKRA RK
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