Gene PsycPRwf_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0079 
Symbol 
ID5206251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp96792 
End bp97409 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content48% 
IMG OID640598288 
Productstress protein 
Protein accessionYP_001278989 
Protein GI148651896 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.244583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTA ATCTGCAAAA AGGACAAAAG ATTTCACTGA GCAAAGAAGC CGGTGGTACG 
CTAACTCAAA TTAAAATGGG CTTAGGTTGG GATGTTGCCG GCTCTGCTGC CCCTGCAAAA
AAAGGCGGCT TTTTAGGCGC ATTATTTGGT GGCGGTGGGT CAGGCGGCGG TGACAGCATT
GATCTGGATG CTTCATGCAT TATGTTTGAT GATAACAAGC AGCCAGTTGA TGCCATCTGG
TTCAATCAAC TGCGCTCTAA AGATGGCAGT ATCTTGCACA CCGGTGACAA CCGCACGGGT
GCCGGTGATG GTGATGATGA GGTCATTAAT GTGGATTTGA GCAAAATCCC AGCCCATGTC
AAGTCATTGG TGTTCACGGT CAATAGCTTT ACCGGTCAGA ACTTCTCTAC CGTTGAAAAC
GCTTATTGCC GTATCGTCGA TGCAGGTAAC AATGCTGAGG TGGCGCGCTA TAACTTATCC
TCTCAAGGCA ATCATACCGC TATGATTATG GCCAAAGTCT ATCGCCATAA TGGTGAGTGG
AAGATGCACG CCATTGGTGA AGTGGCCAGT GGCCGCACCT TTAATGACTT AATGCCAGCG
ATTACCCCTC ACGCCTAA
 
Protein sequence
MAVNLQKGQK ISLSKEAGGT LTQIKMGLGW DVAGSAAPAK KGGFLGALFG GGGSGGGDSI 
DLDASCIMFD DNKQPVDAIW FNQLRSKDGS ILHTGDNRTG AGDGDDEVIN VDLSKIPAHV
KSLVFTVNSF TGQNFSTVEN AYCRIVDAGN NAEVARYNLS SQGNHTAMIM AKVYRHNGEW
KMHAIGEVAS GRTFNDLMPA ITPHA