Gene PsycPRwf_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0078 
Symbol 
ID5206250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp95983 
End bp96735 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content47% 
IMG OID640598287 
Producthypothetical protein 
Protein accessionYP_001278988 
Protein GI148651895 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00113139 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA CCTTTAGTCT TATTGGCACA ATTGAGCCAT TTTTACATTG TAATTTAAAG 
CCTGGCGACT CTATTTATTG TGAAGCCAAT GCGATGGTTA TGATGGAGAA TAATCTTGAG
CTAAAGGGTA AGTTGCAAGG CGGTCTGATG CAGTCCTTGA TGCGCCGATT TGCCAATGAT
GAATCACTGT TTCAACAAGA GATTGCTGCC ACAAATGGGG AAGGGGACTG CTTATTGGCC
CCCACCTTAG ATGGTGACAT GCAGATTTTG GATATTGGCC CTCAGCAATA TACATTAAGT
GATGGCGCCT TTGTGGCAGC TACCCGAGAG GTTGAAGTAA AGGCCAATAT CCAGCGCAAC
TTAGGTGGTG CGGTATTCGG TGATACCGGC GGATTTGTGG TGATGCAGAC CCAAGGCCAA
GGTCAGCTGG TGGTCTCAGG CTTTGGCTCT TTATTTGAGA TTGAGGTGAC GCCCGGCAAA
GATGTGGTCA TCGACAATGG TCATGTGGTG TGCTGGGACT CTAATCTGCA GTACAGTTTA
TCGGTCTCAA CCAGTAAGAA AAAAGGCTTT ATGAGTAATA TCATCAACTC CGTCACCAGT
GGCGAGGGGA TGGTGCTAAA TTTCTCAGGT CAAGGTAAGG TCATCATCTG TTCACGTAAC
CGAGACACCT ATCGAGGCTG GGTACAAAGC ATTTTGGGCA GTAGCTCAGG CGGACGCGGT
GGCAGTGGCG GATTTTTAGA TAATATTTTA TAA
 
Protein sequence
MAATFSLIGT IEPFLHCNLK PGDSIYCEAN AMVMMENNLE LKGKLQGGLM QSLMRRFAND 
ESLFQQEIAA TNGEGDCLLA PTLDGDMQIL DIGPQQYTLS DGAFVAATRE VEVKANIQRN
LGGAVFGDTG GFVVMQTQGQ GQLVVSGFGS LFEIEVTPGK DVVIDNGHVV CWDSNLQYSL
SVSTSKKKGF MSNIINSVTS GEGMVLNFSG QGKVIICSRN RDTYRGWVQS ILGSSSGGRG
GSGGFLDNIL