Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0078 |
Symbol | |
ID | 5206250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 95983 |
End bp | 96735 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598287 |
Product | hypothetical protein |
Protein accession | YP_001278988 |
Protein GI | 148651895 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00113139 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAA CCTTTAGTCT TATTGGCACA ATTGAGCCAT TTTTACATTG TAATTTAAAG CCTGGCGACT CTATTTATTG TGAAGCCAAT GCGATGGTTA TGATGGAGAA TAATCTTGAG CTAAAGGGTA AGTTGCAAGG CGGTCTGATG CAGTCCTTGA TGCGCCGATT TGCCAATGAT GAATCACTGT TTCAACAAGA GATTGCTGCC ACAAATGGGG AAGGGGACTG CTTATTGGCC CCCACCTTAG ATGGTGACAT GCAGATTTTG GATATTGGCC CTCAGCAATA TACATTAAGT GATGGCGCCT TTGTGGCAGC TACCCGAGAG GTTGAAGTAA AGGCCAATAT CCAGCGCAAC TTAGGTGGTG CGGTATTCGG TGATACCGGC GGATTTGTGG TGATGCAGAC CCAAGGCCAA GGTCAGCTGG TGGTCTCAGG CTTTGGCTCT TTATTTGAGA TTGAGGTGAC GCCCGGCAAA GATGTGGTCA TCGACAATGG TCATGTGGTG TGCTGGGACT CTAATCTGCA GTACAGTTTA TCGGTCTCAA CCAGTAAGAA AAAAGGCTTT ATGAGTAATA TCATCAACTC CGTCACCAGT GGCGAGGGGA TGGTGCTAAA TTTCTCAGGT CAAGGTAAGG TCATCATCTG TTCACGTAAC CGAGACACCT ATCGAGGCTG GGTACAAAGC ATTTTGGGCA GTAGCTCAGG CGGACGCGGT GGCAGTGGCG GATTTTTAGA TAATATTTTA TAA
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Protein sequence | MAATFSLIGT IEPFLHCNLK PGDSIYCEAN AMVMMENNLE LKGKLQGGLM QSLMRRFAND ESLFQQEIAA TNGEGDCLLA PTLDGDMQIL DIGPQQYTLS DGAFVAATRE VEVKANIQRN LGGAVFGDTG GFVVMQTQGQ GQLVVSGFGS LFEIEVTPGK DVVIDNGHVV CWDSNLQYSL SVSTSKKKGF MSNIINSVTS GEGMVLNFSG QGKVIICSRN RDTYRGWVQS ILGSSSGGRG GSGGFLDNIL
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