| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0069 |
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| Symbol | |
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| ID | 5204569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 84811 |
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| End bp | 86415 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598278 |
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| Product | cholesterol oxidase |
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| Protein accession | YP_001278979 |
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| Protein GI | 148651886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC GTAAATTTAT TCAATCCATG GGGTTAGGTC TGGGCGCTTC GGCTACTTTA
AGTGGCTGCC AGACTTTGGC AAAAACTGCT CAGCCACTAT CGGCGCCTCA AGTTCAAGCT
GGACATTTTA GTAATATCAT TGTGGGCAGT GGCTATGGTG GCGCGGTATC AGCGCTGCGC
CTGAGTGAGC AAGGCCACAA GGTACTTATC CTTGAGATGG GTATGCGCTG GGATAGAAGC
CCCAACCATG ATACCTTTTG TAAAATGATT ACCGCTGATG AGCGCTCCAG CTGGTTTAGT
CATTGGCCCA ATGCCCCCAT TCCCATCCCC ATTCCTATTA AAAAATATCC TGGGGTGCTC
GATTTGATTG AGTATGATGA CATGAAGGTG TTTGCAGGTC GGGCCTATGG CGGCGGCTCG
ATTGTCAATG GAGCGATTGC TATTGAGCCT AGACGGTCAC ATTTTGAGCA GACCTTTCCT
TGGATTGATG CCAATGAAAT GTATGACACT TTTTTTCCGC GTGCCATGAA GACCTTAAAG
GTCAGTAAAA TTCCCGAAGA CTTTTTTAAT AACTCTGAGC ACTATGAATA TACGCGCGCC
GCTGAGCGTC AGGCTGATAA AGCGGGGCTA ACTACGGAGT TTTTTGGCAA TAGTTATGAC
TTTGACTATA TGCAAAAAGA GGCAAAAGGG GAGGTGTACC CATCGGCTTT AGGCGGTGAG
GTGATCTATG GCAATAATGC AGGCAAGTAC TCTTTGGATT TGACCTATCT TAAACAGGCA
GAAGCTACCG GTAATGTCAG TGTCAGAACC CTACGTAAAG TTAATAGCAT TCAAGCACTT
GATAACCATC AACTCAGACT TGAGGTGCAG GTACTCAATA AAACCGGCGG CATTGATGCC
ATAGAATATT ACACCTGCGA TAAATTGTTT TTGAATGCCG GCAGTACCGG CACCTCAGAG
CTGCTGCTAA AGAGCCAAGC TCAGGGTAAA TTGACTCAGC TTAATGAGCA CATTGGGCAG
CATTGGGGGC CCAATGGTAA TATCATGACC GGCCGCAATT TTGTACATGC TGCAGGTAAG
ATTCAGTCCA CCATTCCGGT TAAAGGGATC AACATGTGGG ATGGTGATAG AGGTGGATCA
AAGTACAAGA TATTTGCCGA ATTGGCACCG CTGCCGTTGG GTCTTGAGAC TTGGACCACC
TTGTACTTGG CAATTACCGA TAACCCAGAG CGTGGTCATT ATTATTATGA TAAAGCCTCG
CAAAGCGTAA AACTTAATTG GAAACGCTCA CAAAATGAGT ATTCAGTGAA TGCCGCAAAA
GAGCTGATTG AAAAATTGGC TCAGGCGAAT GGCGGGCGGG TATCAAGCTT ACTGTTTAAC
CAAGGTTTTG GGGATGACTT CTGCTATCAT CCCTTAGGTG GCTGTGTGCT TGGCAAGGCC
ACAGATGAAT TGGGCCGTGT CAAAGGCCAT CGCAATATTT ATGTACAAGA CGGGGCGCTT
ATTCCTGGCA GTGCTGGGGT TAACCCTTAT GTCTTTATTA CTGGGCTTGC TGAGCGTAAT
ATGGCCTATA TCCTTCAACA AGACTTCTCG TCGTCGACCC CTTAA
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| Protein sequence | MKRRKFIQSM GLGLGASATL SGCQTLAKTA QPLSAPQVQA GHFSNIIVGS GYGGAVSALR
LSEQGHKVLI LEMGMRWDRS PNHDTFCKMI TADERSSWFS HWPNAPIPIP IPIKKYPGVL
DLIEYDDMKV FAGRAYGGGS IVNGAIAIEP RRSHFEQTFP WIDANEMYDT FFPRAMKTLK
VSKIPEDFFN NSEHYEYTRA AERQADKAGL TTEFFGNSYD FDYMQKEAKG EVYPSALGGE
VIYGNNAGKY SLDLTYLKQA EATGNVSVRT LRKVNSIQAL DNHQLRLEVQ VLNKTGGIDA
IEYYTCDKLF LNAGSTGTSE LLLKSQAQGK LTQLNEHIGQ HWGPNGNIMT GRNFVHAAGK
IQSTIPVKGI NMWDGDRGGS KYKIFAELAP LPLGLETWTT LYLAITDNPE RGHYYYDKAS
QSVKLNWKRS QNEYSVNAAK ELIEKLAQAN GGRVSSLLFN QGFGDDFCYH PLGGCVLGKA
TDELGRVKGH RNIYVQDGAL IPGSAGVNPY VFITGLAERN MAYILQQDFS SSTP
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