| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0042 |
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| Symbol | def |
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| ID | 5206065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 53180 |
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| End bp | 53710 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640598250 |
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| Product | peptide deformylase |
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| Protein accession | YP_001278952 |
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| Protein GI | 148651859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATAT TACCGATTTT AAGCTACCCC GACCCTAGGC TGCGTACCAT CGCAGAGCCA
ATCAAAACTG TTGATGCTGA AATAAAACAG CTTATCAAAG ACATGATTGA AACCATGTAT
GACGCCAAAG GCATTGGGCT TGCAGCCACT CAAGTGGATC GTCATATTCA GCTTATCGTC
ATGGATTTGT CTGAAAACAA TGACTCGCCT CGGGTATTTA TTAACCCCAA AGTTACCCCG
TTGGTGGAAG ATAAAAAGCC TTACGAGGAA GGGTGCCTGT CGGTACCAGA TGTCTATGAT
TCAGTGGATC GTCCAGTAAA AGTGAAAATC GAAGCGCTTG ATGCAGATGG CAATGCCTTT
GAAGAGATTG CAGAAGGCCT ATTGGCAGTG TGTATCCAGC ATGAAATGGA TCACTTAAAC
GGTGTCTTGT TCGTCGATTA TTTATCACGC CTAAAGCAGA CCCGTGCCCG TGATAAGGTC
AAAAAATATC TTAAAACCCG TGAAAAGCAA CTACAGCACA ACAAAGCCTA G
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| Protein sequence | MAILPILSYP DPRLRTIAEP IKTVDAEIKQ LIKDMIETMY DAKGIGLAAT QVDRHIQLIV
MDLSENNDSP RVFINPKVTP LVEDKKPYEE GCLSVPDVYD SVDRPVKVKI EALDADGNAF
EEIAEGLLAV CIQHEMDHLN GVLFVDYLSR LKQTRARDKV KKYLKTREKQ LQHNKA
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