Gene PsycPRwf_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0015 
SymbolguaA 
ID5205626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp20646 
End bp22244 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content50% 
IMG OID640598223 
ProductGMP synthase 
Protein accessionYP_001278925 
Protein GI148651832 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.235317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATAG CCGCACCCAC CATCAAAGAA GACCGCATTT TAATTATCGA TTATGGCTCA 
CAGTACAGCC AGCTGATTGC CCGCCGTGTT CGTGAAGCGG GCGTATTCTG CGAAATGTAC
CCTTATGATA TCGATACCAG TCGTATCGAA GCATTCGGTG CCAAAGGGGT GATCTTATCA
GGTGGCCCTG AAAGTGTGCA CGACGAAAAC AGCCCAAGAA TCAATCAAGC TTTGTTTGAT
TTAAATGTGC CGATCTTAGG CATCTGCTAC GGCATGCAGG CCATGGCCGA TCACTTCGGT
GGTAAGGTTC AGGCAAGTGA TGTGCATGAA TTTGGCGCGG CTACCATTGA TGTGACGGGC
CATAGTGCTT TACTTGATGG CATTGAAGAT GAGCACAAAG ACAACAGCCG CTTGCATGTG
TGGATGAGCC ACGGTGACAA AGTAGTTGAA GCCCCTAAAG GCTTTGATAT CGTCGCCAGT
ACGCCAAGCT GCCCCATCGC CGTGATGGTC AATGAAGACA AAAAATACTA TGGCCTACAA
TTCCATCCAG AGGTGACGCA CACCTTACAA GGCGACGTGT TATTGTCTCG CTTTGTGCAT
CAAGTGTGTG GCTGCGCCGG TGACTGGACG CCAGATAACA TCATCGATAT GCGGGTTGAG
CAATTAAAAG AGCAAATCGG TGATAAGCAA GTTCTACTTG GCCTATCAGG TGGTGTGGAC
AGCTCAGTTG TGGCGGCCTT ATTACACAAA GCCATTGGCG ATCAGCTGAC TTGTGTGTTC
GTGGATAATG GTCTACTGCG TCTGCACGAA GGCGACCAAG TGATGCAAGT ATTCGCCGAA
AATATGGGCG TAAAAGTGGT GCGTGTCGAT GCTGAAGATC GCTTCTTAAG CGCATTAGCG
GGTGAGAGTG AGCCGGAAGC TAAGCGTAAA ATCATCGGCA AAACCTTTAT CGATGTATTC
GCCGATGCCG CCCGTGATAT CAGCCAAGGC AGCGACGGTA AGCCGGTTGA GTTCTTAGCG
CAAGGTACCA TTTACCCAGA CGTGATTGAA TCTGCCAAAT CACACCAAGG TAAAGCGCAC
GTCATTAAGA GCCATCACAA CGTAGGCGGC TTGCCCGATG ATTTACAGTT TGAATTGGTT
GAGCCATTAC GTGATCTGTT CAAAGATGAA GTACGCAAAC TGGGTATCGC CTTAGGCTTA
CCACACAAAA TGATTTATCG TCATCCATTC CCAGGCCCAG GTCTAGGCGT ACGCATCTTA
GGCGAAGTCA AAAAAGAATA CGCCGACATC CTGCGTCAAG CGGATGCTAT CTTCATGCAA
GAGCTTGAGC GCTCAGGCTG GTATGAGAAA ACCGCGCAGG CCTTTGCAGT ATTTACCCCA
GTGAAATCTG TCGGCGTGGT GGGTGATGGC CGCCGTTATG CGTGGGTTAT CGCCCTACGT
GCGGTTGAAA CCATCGACTT TATGACCGCC CGCTTTGCGC ACTTGCCATA CGAGCTGATC
GAGACGGTGA GTAACCGCAT CATGAACGAA ATCAAAGATG TGTCTCGTGT GACTTATGAT
GTGTCGAGCA AGCCGCCGGC GACTATTGAG TGGGAATAA
 
Protein sequence
MSIAAPTIKE DRILIIDYGS QYSQLIARRV REAGVFCEMY PYDIDTSRIE AFGAKGVILS 
GGPESVHDEN SPRINQALFD LNVPILGICY GMQAMADHFG GKVQASDVHE FGAATIDVTG
HSALLDGIED EHKDNSRLHV WMSHGDKVVE APKGFDIVAS TPSCPIAVMV NEDKKYYGLQ
FHPEVTHTLQ GDVLLSRFVH QVCGCAGDWT PDNIIDMRVE QLKEQIGDKQ VLLGLSGGVD
SSVVAALLHK AIGDQLTCVF VDNGLLRLHE GDQVMQVFAE NMGVKVVRVD AEDRFLSALA
GESEPEAKRK IIGKTFIDVF ADAARDISQG SDGKPVEFLA QGTIYPDVIE SAKSHQGKAH
VIKSHHNVGG LPDDLQFELV EPLRDLFKDE VRKLGIALGL PHKMIYRHPF PGPGLGVRIL
GEVKKEYADI LRQADAIFMQ ELERSGWYEK TAQAFAVFTP VKSVGVVGDG RRYAWVIALR
AVETIDFMTA RFAHLPYELI ETVSNRIMNE IKDVSRVTYD VSSKPPATIE WE