Gene PsycPRwf_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0005 
Symbol 
ID5204559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp6078 
End bp8732 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content46% 
IMG OID640598213 
ProductDNA gyrase, B subunit 
Protein accessionYP_001278915 
Protein GI148651822 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000126845 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.17646e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAT CAAACCATAA TACCGAGCAA GCGCTAGTAC AAGGCTTGCC TGAAGGGGTC 
GATGCCACAG ACTTACCAGC AGGTGCAGAG CCAGAAGAAT ATAGCTCAAA AAATATTCGA
GTATTAAGAG GCCTTGAAGC TGTACGCGTG CGTCCGGGAA TGTATATCGG GGATACTGAT
GACGGTACTG GCTTACACCA CATGGTGTTT GAAGTAGTCG ACAACTCAAT TGACGAGGCA
TTGGCAGGGC ACTGTGACCA AATCGATATC ATCATCCATG AAGATGAATC GGTCAGTGTG
ATGGACAATG GCCGTGGTAT TCCTATCGAT GTGCATCCTG AAGAGGGCGT GTCGGCCGCT
CAGGTCATTA TGACCGTGCT GCATGCCGGT GGTAAGTTCG ATGACAACAG TTATAAGGTG
TCAGGCGGCT TGCACGGCGT GGGTGTCTCA GTAGTGAACG CCTTATCCAA AAAGCTTGAG
ATGAATATTT GGCGTGAAGG CCATCATTAT CAGCAGACGT ATAGCGATGG CGTACCAGAT
AGCGATATTC AAGAATTAGA AAAAACCAAT AAGACAGGTA CTCAAATTCG TTTTTATCCG
AGCCCAGAGG TATTTACCGG TACCGTATTT GACTTTGATA TTTTAGCCAA GCGTTTACGT
GAGTTGTCAT TTTTAAACTC AGGGGTTCGC ATTGTGCTAA CCGATGAGCG TACAGACAAA
CAGCATGTGT TCGAGCACAA AGGTGGGCTA TCGGAGTTTG TGGCTTACAT CAATTCTGGC
AAAGAAGGCC TAAATGATGT CTTTCATTTT GTCAGTGAGC AAGAAGACGG TATCGTTGTG
GAAGCGGCAC TGCAGTGGAC AGATACTTAT AATGAAAAAG TGCTGTGTTT TACCAACAAC
ATCCCACAAA AAGATGGCGG CACTCACTTA TCAGGTTTCC GCTCAGCCTT AACCCGTTGT
CTAAATAGCT ATATGGACAA TGAGAAACTG GTTAAAAAAG AAAAAGTGAA CACCACAGGC
GACGATGCGC GTGAAGGTTT AACCGCCATT GTTTCGGTCA AAGTACCTGA TCCTAAATTC
TCAAGTCAGA CCAAAGACAA GCTGGTATCG AGCGAAGTAA AATCCGCTGT TGAATCAGCG
ATGCATGACA AGTTTAATGA CTACTTGCTT GAGCATCCAG GTGCGGCAAA ATCTATTGCC
AATAAGATTA TTGATGCGGC CCGTGCTCGC GATGCGGCCC GTAAAGCACG TGAATTAACG
CGTCGTAAAA CCACTTTAGA CATCGCTGGT CTGCCCGGTA AACTGGCTGA TTGCCAAGAA
AAAGACCCAG CATTGTCTGA ATTATATATT GTGGAGGGTG ACTCAGCAGG TGGTTCTGCC
AAGCAGGGTC GTAGCCGTAA AACTCAGGCT ATTTTGCCGC TTAAAGGTAA GATCCTAAAC
GTTGAGCGTG CCCGTTTTGA CAAGATGTTA TCCTCTGCTG AAGTCGGTAC GTTAATCACC
GCGCTAGGCT GTGGTATTGG CCCAGATGAG TACAATCCAG ATAAAGTACG TTATCACAAA
ATCATCATTA TGACCGATGC CGACGTGGAT GGCTCACACA TTCGTACACT GCTTTTGACC
TTCTTCTTCC GTCAAACACC AGAGCTTATC GAACGAGGCT ATGTCTATAT TGCTCAGCCG
CCTTTGTACA AGATAAAAAA AGGCCGTCAA GAGCTGTATC TAAAAGATGA TGAGGCGCTC
AAAGCGTATC TATTATCCTC GACGATTGAT GAGATGAATC TACACATTAG TGAAGATGCA
CCAGCCATTA CCGGTCAAGC CTTAGAGACG TTATTAAACG ATTATAACCA AACACAACTG
GTGAAAGCAC GTTTGCAGAT TCGTTATCCT GCAATATTGC TCGATGCTTT GACTCATGTG
CCTAAGCTGA CTACAGACAT GACTTACGAC TTCGATGCCA TGACTGAGTG GAAGCAGCAG
TTGCAGGCTC AGCTAGAGCA CTTCGGTAGT GATTTGCGCC CCTCCATTGA GCTTGATAAC
ATCCATGCGC CGCGCACAGA TGAGCTGTCT GAAGCGGCTA AAGATGCCAA CAATCAGTTT
AAATTTAAAA TCGGCGCAAA AGTAGACAGC CCGAATAGTG ATATTGAAGA TGCCGAAGTT
GTGGAAGGTC AAGACAGCGA CATGCTATCA ACCAAGCCGC AGTGGTTGCC TCGTATTACC
ATTTACGTAC ATAACTTGGC ACAGCATTAT CTGCTTGATG CCGGCTTCTT TAATTCAGGC
GAATACGCAC GCTTGATGCG TCTGTCAAAA CAGTGGAATA CGTTGCTGAC AGAGTCCGCC
TTTATCCGCC GTGATACCAC AGCTGGTGGC AGCAAAGATA CTCTAATTCG CAACTTTGAT
CATCTATGGC AACAAGTGAT GCAAGAAGCC CGTCGTGGTC TGTCTGTGCA GCGCTACAAA
GGGCTGGGCG AGATGAACGC CGACCAGCTT TGGGACACCA CCATGGATCC TGAGAACCGC
CGTATGTTAA AGGTCACCAT TGAGGATGCG ATTGCCGCTG ATCATTTATT CATGTGCTTG
ATGGGCGATG ATGTAGAGCC GCGCCGTCAG TTCATTGAAG AAAATGCCTT AACCGTTACC
AATCTTGATA TCTAA
 
Protein sequence
MSESNHNTEQ ALVQGLPEGV DATDLPAGAE PEEYSSKNIR VLRGLEAVRV RPGMYIGDTD 
DGTGLHHMVF EVVDNSIDEA LAGHCDQIDI IIHEDESVSV MDNGRGIPID VHPEEGVSAA
QVIMTVLHAG GKFDDNSYKV SGGLHGVGVS VVNALSKKLE MNIWREGHHY QQTYSDGVPD
SDIQELEKTN KTGTQIRFYP SPEVFTGTVF DFDILAKRLR ELSFLNSGVR IVLTDERTDK
QHVFEHKGGL SEFVAYINSG KEGLNDVFHF VSEQEDGIVV EAALQWTDTY NEKVLCFTNN
IPQKDGGTHL SGFRSALTRC LNSYMDNEKL VKKEKVNTTG DDAREGLTAI VSVKVPDPKF
SSQTKDKLVS SEVKSAVESA MHDKFNDYLL EHPGAAKSIA NKIIDAARAR DAARKARELT
RRKTTLDIAG LPGKLADCQE KDPALSELYI VEGDSAGGSA KQGRSRKTQA ILPLKGKILN
VERARFDKML SSAEVGTLIT ALGCGIGPDE YNPDKVRYHK IIIMTDADVD GSHIRTLLLT
FFFRQTPELI ERGYVYIAQP PLYKIKKGRQ ELYLKDDEAL KAYLLSSTID EMNLHISEDA
PAITGQALET LLNDYNQTQL VKARLQIRYP AILLDALTHV PKLTTDMTYD FDAMTEWKQQ
LQAQLEHFGS DLRPSIELDN IHAPRTDELS EAAKDANNQF KFKIGAKVDS PNSDIEDAEV
VEGQDSDMLS TKPQWLPRIT IYVHNLAQHY LLDAGFFNSG EYARLMRLSK QWNTLLTESA
FIRRDTTAGG SKDTLIRNFD HLWQQVMQEA RRGLSVQRYK GLGEMNADQL WDTTMDPENR
RMLKVTIEDA IAADHLFMCL MGDDVEPRRQ FIEENALTVT NLDI