| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4621 |
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| Symbol | |
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| ID | 5211607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5788754 |
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| End bp | 5791246 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640598200 |
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| Product | alpha beta-propellor repeat-containing integrin |
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| Protein accession | YP_001278902 |
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| Protein GI | 148658697 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.184337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0506116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCTT GGAAAAGACT CAGCGCGCCC GTTGCGGGCG TTGTACTGAT CACGCTGCTC
ACGCTGTTTG CACCCGCCCG GTCGGTGATG ATGCAATCAT CGCTGACGTT TACGCAGACA
AAACTTCTCG CTGCGGATGC TGCGCAGTAC AATTATTTTG GGTTATCGGT TGCAGTCAGG
GGTGATACGG CGATCGTCGG CGCCTACGGG AAGTCAGATC TTGTGCGGAA TGCTGGCGCT
GCTTATGCGT TCACCCGCAA CGCCGGATCG TGGACGCAGC AGGCGCGACT GGGAACATCA
AGCCCTCTGA TCGACGCATA CCTCGGCGCA ACCGTGGCTA CCAATGGGTC GTACACGGCG
GCGGGCGCGC CGTATGCCAG TGTTGGCGCA CAGAATGACG GCGTGGTGTA TCTCTTCTCC
AACGCTACCT GGCAACAGCA GACGATCCTT CTGCCCAATG ATCCCGACTC GCTGTCACAG
TTTGGCAATG CGCTTGCAAT CAATGACAAC ACCCTTTTTG TCGGTGCGCC GATGCACGAC
TCCTTCGGCG TCAACGCCGG TGCGGTGTAT GTATTTACCT TCGATGGCGC CTCCTGGGTG
CAACAGCAAA AGTTAATCGG CGTCGACACC GCCCCCGGCG ATCGTTTTGG CAGCGCACTG
GCGCTGAACG ATGGCTGGCT GGCAGTGAGC GCGCCGCTCC ATAGTTCACC TGGAAGTCCA
GGCGGCGCAG TGTACCTTTT CGAGTTTGAC GGCGTCTCCT GGGTGCAACG GTATAAAGTA
GGTGCGCCCG ATACCATTGC AGGCGATCGT TTTGGCAGCG CAATTGCGCT GGACGATGGC
TGGCTGGCGG TCGGCGTGCC GCTGCACCGT TTCGTTGGAA GTGCCAGCGG CGCCGTTTAT
CTTTTTGAAT TTAACGGAAC AGCCTGGGTG CAGCGGCAGA AGTTCGTCGC CAGCGATACC
GCTGGCAGTG ACCAGTTTGG CAGCGCACTG GCGCTCGAAA ACCGGCGACT CGTCGTCGGT
GCGCCATTGC ACAATTCAAA CGGACCTGCA AGCGGCGCCG TTTACATCTT CGAGCGCGCG
ACAACCACGT GGATTGAGCG CGCAAAACTG ATCGGCAGCG ACACCAACGC TGGCGATAGA
TTGGGCGGAT CGATCAGTAT TGACGGTAAT ACCATTCTCG TGGGCGCCTA TGGCGATACA
GCCGCCGGTC CGGCAACAGG CGCAGCATAT GTGTTCGTTG AAGTGACAGG TCCAGGAGTG
ACGACCACAC CGTCGATCAT CGTCACTCCA ACGGAGACCA GCACCCCCTC GGCGACGCCA
TCCAATACGC CGTCGCCCAC CTTTACCAGC ACCCCCTCGG CGACGCCATC CAATACGCCG
TCGCCGACCT TCACCAGCAC CCCCTCGCCG ACCCCCTCGG CCACGCCGAC CTTCACCAGC
ACCCCCTCGC CGACCCCCTC GGCCACGCCG ACCTTCACCA GCACCCCCTC GCCGACCCCC
TCGGCCACGC CGACCTTCAC CAGCACGCCC TCGCCGACCC CCTCGGCCAC GCCGACCTTC
ACCAGCACGC CCTCGCCGAC CCCCTCGGCC ACGCCGACCT TCACCAGCAC GCCCTCGCCG
ACCCCCTCGG CCACGCCGAC CTTCACCAGC ACGCCCTCGC CGACCCCCTC GGCCACGCCG
ACCTTCACCA GCACGCCCTC GCCGACCCCC TCGGCCACGC CGACCTTCAC CAGCACGCCC
TTGCCGACCC CCTCGGCCAC GCCGACCTTC ACCAGCACGC CCTCGCCGAC CCCCTCGGCC
ACGCCGACCT TCACCAGCAC GCCCTCGCCG ACCCCCTCGG CCACGCCGTC CAATACCCCC
TCGGCCACCC CGTCCAATAC TCCAACAGCA ACGGCAACTG TTCCGCCGGG AACGGGAACG
CCTCGCCCGA TCCTCGCGTG CGTCGCGCGA CGTTCACCTG CAAGTTATGT CGCTATCTTT
GGATACGAGA TGGAAGGGAC GGCGCCGGTG CATATGCCGG TGGGTGGCGA AAACCGGTTC
AATCGCTATC GGGAAGACCT CGGTCAGCCA ACCACGTTTG AGCCAGGCAC GCGGCGAGCA
GCGTTCGCAG TAGTCTTCGA CGGCTTGCCG CTGACGTGGT CACTGGCGGG GCGACAGGTG
ACGGCATGGG CGAATTATCC GATTCGCTGC AGCAGCGATG CTGTTGTGCG CATCCAACCC
ATACTGGAGT GCACGCTGCC GGATAGCAAT GGCACAACGA TCGCGCGGTT CGGGTATCGA
AATGACAATG CGTTCAATGT CGCCGTGCCT GTCCGGTGGC AAAACTTCTT CGTTCCGGCG
CCGATCCAGC GCGGGCAGCC GGTTGTCTTC GCGCCTGGCA GACATCGGTT CGTCTTTGAA
ACCGGTTTCT CACGAGGTGC GCTGGTATGG TTCCTGGATG GACGAATAGC AGTAGCAACC
AATGCGCCCG TACAGGCGTG CCAGTTCAAC TGA
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| Protein sequence | MRSWKRLSAP VAGVVLITLL TLFAPARSVM MQSSLTFTQT KLLAADAAQY NYFGLSVAVR
GDTAIVGAYG KSDLVRNAGA AYAFTRNAGS WTQQARLGTS SPLIDAYLGA TVATNGSYTA
AGAPYASVGA QNDGVVYLFS NATWQQQTIL LPNDPDSLSQ FGNALAINDN TLFVGAPMHD
SFGVNAGAVY VFTFDGASWV QQQKLIGVDT APGDRFGSAL ALNDGWLAVS APLHSSPGSP
GGAVYLFEFD GVSWVQRYKV GAPDTIAGDR FGSAIALDDG WLAVGVPLHR FVGSASGAVY
LFEFNGTAWV QRQKFVASDT AGSDQFGSAL ALENRRLVVG APLHNSNGPA SGAVYIFERA
TTTWIERAKL IGSDTNAGDR LGGSISIDGN TILVGAYGDT AAGPATGAAY VFVEVTGPGV
TTTPSIIVTP TETSTPSATP SNTPSPTFTS TPSATPSNTP SPTFTSTPSP TPSATPTFTS
TPSPTPSATP TFTSTPSPTP SATPTFTSTP SPTPSATPTF TSTPSPTPSA TPTFTSTPSP
TPSATPTFTS TPSPTPSATP TFTSTPSPTP SATPTFTSTP LPTPSATPTF TSTPSPTPSA
TPTFTSTPSP TPSATPSNTP SATPSNTPTA TATVPPGTGT PRPILACVAR RSPASYVAIF
GYEMEGTAPV HMPVGGENRF NRYREDLGQP TTFEPGTRRA AFAVVFDGLP LTWSLAGRQV
TAWANYPIRC SSDAVVRIQP ILECTLPDSN GTTIARFGYR NDNAFNVAVP VRWQNFFVPA
PIQRGQPVVF APGRHRFVFE TGFSRGALVW FLDGRIAVAT NAPVQACQFN
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