| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4616 |
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| Symbol | |
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| ID | 5211602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5783363 |
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| End bp | 5784568 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640598195 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001278897 |
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| Protein GI | 148658692 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.317944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTATCTT ACCGTGTGCA CATAATCAAT TGGCCGTTAT GCACAGAAGG TTGGTGGAAT
GTGAAAGAAC CCCTCGACTC CTTCCTGGCC ACGGCCCACG ACGAGTCGCA GACCTCTCCG
CGCAATCACG TTCGCGTCCA TCACCCTGCC GCCGAATCGA TGTCTGAAAC GATCGATCAC
ATCCTCGAAC GCACTGCTGG AGAACCCTTC GACCAGACCA TTGACGCTTT TCACGCCGAC
CGTGATCATG AAGAAGACGA AGCGCTGGAT CGCGACTTCG ATGCCGACGT TGAAAGCATG
GGCGTCGATG ATCCGGTGCG CGTGTATCTC CGTGAAATCG GGCGGGTGAA TCTGCTCACC
GCTCAGGAAG AGATCATGCT GGCGCAGCAG GTGGAACGTG GCGAGCAGGC GAGCGAACGA
TTGCAGAAAG GCGACTACGC CCCTTCAGAG CGCCTCCAGC TTCACCGGTG GGTCCAGGAA
GGGCAGGCTG CGCGCGAACG CCTCATCCAG GCGAACCTGC GCCTGGTCGT TTCGATTGCA
AAGAAATATC TTGGTCGTGG GATGTCGCTG CTCGACCTGA TCCAGGAGGG CAATATCGGG
CTGATGCGCG CAACTGAGAA GTTCGATTAT CGCAAAGGGT ACAAGTTTTC GACCTATGCC
ACCTGGTGGA TCCGTCAGGC GATCACACGT GTGATTGCCG ATCAGAGTCG CACCATCCGT
CTGCCTGTCC ATGTCGGCGA AACGATCAAT CGCGTCATGC GCGCCAGCAA TCGCATTCAG
CAGACCACCG GGCGCGATCC GACGCCGGAC GAGATCGCGC TCGAACTCGG TATTCCGGTC
GAGAAGGTCC GTCGGGTGCT CGAAGCGGCG CGCCAGACGA TCTCGCTCGA AACGCCGATC
GGAACTGAGG GCGATACGGT GCTGGCTGAC TTTATCGAAG ACGGTAAAGG CGTCACTCCG
ATGGATAGCG CATCTCACCA CATTCTGCGG GAGCAGATCG ATAGCGCCCT CGAAAAATTG
CCCGAACGCG AACGCCGCAT TATTCAGTTG CGCTACGGTT TGTACGACGG TCACTATCGC
ACGCTGGAAG AAGTGGGACG CGAATTCGGC ATTACGCGCG AACGCATCCG GCAGATCGAG
GCGCGTGTGC TGCGCAAATT GCGCCATCCG CACTATGGGC GCGGTCTGCG TGGTTATCTG
GAGTGA
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| Protein sequence | MLSYRVHIIN WPLCTEGWWN VKEPLDSFLA TAHDESQTSP RNHVRVHHPA AESMSETIDH
ILERTAGEPF DQTIDAFHAD RDHEEDEALD RDFDADVESM GVDDPVRVYL REIGRVNLLT
AQEEIMLAQQ VERGEQASER LQKGDYAPSE RLQLHRWVQE GQAARERLIQ ANLRLVVSIA
KKYLGRGMSL LDLIQEGNIG LMRATEKFDY RKGYKFSTYA TWWIRQAITR VIADQSRTIR
LPVHVGETIN RVMRASNRIQ QTTGRDPTPD EIALELGIPV EKVRRVLEAA RQTISLETPI
GTEGDTVLAD FIEDGKGVTP MDSASHHILR EQIDSALEKL PERERRIIQL RYGLYDGHYR
TLEEVGREFG ITRERIRQIE ARVLRKLRHP HYGRGLRGYL E
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