| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4607 |
|---|
| Symbol | |
|---|
| ID | 5211593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5773293 |
|---|
| End bp | 5774213 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640598186 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001278888 |
|---|
| Protein GI | 148658683 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.71448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAATCG TTTCGTTCAA CACGCGCGAT CTTCTCGCTG GGTGCCTTGA GTCGCTCACG
ACGTGTTCTT TGCCGTTTCA CGTCGTTGTA GTAGACAATG CGTCACGTGA TGGCAGCGCA
GCGCTGGTGC GTTGTCGCTT CCCCTGGGTG ACACTCATCG ATGCCGGGCG TAATCTGGGG
TTTGCCGCTG CGACCAATCT GGCGATTCGC ACGGTGCGCG ATCTGCATCC GACGCTTGAG
TATGTGCTAG CGCTCAACCC CGATACCGTG GTGGGCGAGG GCGCTATCGA GACGCTGGTC
GCTTTTCTGG ATGCGCATCC CCGTGTCGGT ATCGTTGCTC CACGGTTGTT GAATCCGGAT
GGGACTGTTC AGTCTGCGGC GTTTCGCTTT CCGACGCTGC TGATGACGGT GCTCGATCTT
TTTCCGCCGG GTGAGGTGTT GCCCGGACGC CTCTACAACT CCTGGTGGCA TGGTCGCTAC
CCGCAGGAGC AATCCGGCGC TGCGCCGTTC CCGATCGATC ATCCTCTCGG CGCGTGTATG
CTCGTCCGCT GTGCGGTGAT CGATCAGATT GGCATGCTCG ATGAGGAGTA CTTTATGTAT
GCCGAGGAGG TAGACTGGTG TTATCGCGCC CGACGCGCGG GATGGGCTAT CTGGCAGGAA
CCTCGCGCGC AGGTGGTGCA CATCGGCGGC GCTGCGACCG GTCAGTTTCG CGCCCGGATG
CTGGTGGCGC TGTATGCCAG TCGGTTACGC TTCTTTCGCA AGCACTATAG CGCGCCCATT
GCCGATCTCC ACGCGGCGAT CATCCGCGCT GGCATGGTGC GCCTGATCCT CGGCGCCTGG
CGCGCCTATG CGAACCGGGC TATCGGGCGC GATGAGTTGC GGTCGCGGTT GTGGGCGTAT
GGGAGTATTC TGCGTTTATG A
|
|---|
| Protein sequence | MAIVSFNTRD LLAGCLESLT TCSLPFHVVV VDNASRDGSA ALVRCRFPWV TLIDAGRNLG
FAAATNLAIR TVRDLHPTLE YVLALNPDTV VGEGAIETLV AFLDAHPRVG IVAPRLLNPD
GTVQSAAFRF PTLLMTVLDL FPPGEVLPGR LYNSWWHGRY PQEQSGAAPF PIDHPLGACM
LVRCAVIDQI GMLDEEYFMY AEEVDWCYRA RRAGWAIWQE PRAQVVHIGG AATGQFRARM
LVALYASRLR FFRKHYSAPI ADLHAAIIRA GMVRLILGAW RAYANRAIGR DELRSRLWAY
GSILRL
|
|---|
| |