Gene RoseRS_4601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4601 
Symbol 
ID5211587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5766769 
End bp5767617 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content63% 
IMG OID640598180 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001278882 
Protein GI148658677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.809915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAACG AACCAGGCAG ATTGCTGATC ACCGGCGGCA GTGGATTTCT GGGCGCGAGA 
CTGGTGGAAC TGGCGCTCGC GCAAGGTTGG GACGTTGTTG CAACCTGTCA CTCGCGCAGA
CCGCAAACTC CAGGTGTGCG CTGGGAGACG CTGGATCTGC GCAACGCAGC GGCAACCCGG
AGATTGGTTG AGCAGGTGAC GCCCGATGTT GTCATTCACA CCGCCTACCG GCAGGAAGGA
CCGGACATGA TGGCGATCAT CGGTGAAGGA TCAGCGGCTG TCGCGCAGGG TGCTTTCGCG
GTACAGGCGC GTCTGATCCA TCTGTCGAGC GATGTTGTTT TCGACGGAGA ACGGATCGGC
AGATACACCG AAACGGATGA ACCGCAACCG GTCACGACAT ACGGCGCCGC CAAAGCGCTG
TCCGAACGCC TGGTCGCCGC AGCCCATCCC GGAGCGCTGA TTGTCCGCAC ATCGCTGATC
TACGGTGGTC CGGATCGCCC CGGCAGGCAT GAGCGATTCG TGCTCGATGT GCTCGATGGG
CGCGCAGAGG CGGTCTTTTT CACCGATGAA CTGCGCTGCC CGATCGAAGT CGGCGATCTG
GCAGCGGCGT TGCTGGAACT CGCTACCATC GACAGGAGCG GCATTGTGCA TGTCGCCGGA
TCGGACGTGG TCAGTCGTTA CGAATTCGCC TGTCTGGTGG CGCGTGCATT TGGGCGCGAT
CCTTCTGGCT TGTGCGGCGG TCTTAGCCCG GCAGCGCCCC GCCGACCGCG GAACTGCGCG
CTGGATAGCC AGGTCGCGCA GCGCATGTTG ACAACGCGCC TGCGAGGAGT TCGGGAGGTG
CTGGGATGA
 
Protein sequence
MKNEPGRLLI TGGSGFLGAR LVELALAQGW DVVATCHSRR PQTPGVRWET LDLRNAAATR 
RLVEQVTPDV VIHTAYRQEG PDMMAIIGEG SAAVAQGAFA VQARLIHLSS DVVFDGERIG
RYTETDEPQP VTTYGAAKAL SERLVAAAHP GALIVRTSLI YGGPDRPGRH ERFVLDVLDG
RAEAVFFTDE LRCPIEVGDL AAALLELATI DRSGIVHVAG SDVVSRYEFA CLVARAFGRD
PSGLCGGLSP AAPRRPRNCA LDSQVAQRML TTRLRGVREV LG