Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4601 |
Symbol | |
ID | 5211587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5766769 |
End bp | 5767617 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640598180 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001278882 |
Protein GI | 148658677 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.809915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAGAACG AACCAGGCAG ATTGCTGATC ACCGGCGGCA GTGGATTTCT GGGCGCGAGA CTGGTGGAAC TGGCGCTCGC GCAAGGTTGG GACGTTGTTG CAACCTGTCA CTCGCGCAGA CCGCAAACTC CAGGTGTGCG CTGGGAGACG CTGGATCTGC GCAACGCAGC GGCAACCCGG AGATTGGTTG AGCAGGTGAC GCCCGATGTT GTCATTCACA CCGCCTACCG GCAGGAAGGA CCGGACATGA TGGCGATCAT CGGTGAAGGA TCAGCGGCTG TCGCGCAGGG TGCTTTCGCG GTACAGGCGC GTCTGATCCA TCTGTCGAGC GATGTTGTTT TCGACGGAGA ACGGATCGGC AGATACACCG AAACGGATGA ACCGCAACCG GTCACGACAT ACGGCGCCGC CAAAGCGCTG TCCGAACGCC TGGTCGCCGC AGCCCATCCC GGAGCGCTGA TTGTCCGCAC ATCGCTGATC TACGGTGGTC CGGATCGCCC CGGCAGGCAT GAGCGATTCG TGCTCGATGT GCTCGATGGG CGCGCAGAGG CGGTCTTTTT CACCGATGAA CTGCGCTGCC CGATCGAAGT CGGCGATCTG GCAGCGGCGT TGCTGGAACT CGCTACCATC GACAGGAGCG GCATTGTGCA TGTCGCCGGA TCGGACGTGG TCAGTCGTTA CGAATTCGCC TGTCTGGTGG CGCGTGCATT TGGGCGCGAT CCTTCTGGCT TGTGCGGCGG TCTTAGCCCG GCAGCGCCCC GCCGACCGCG GAACTGCGCG CTGGATAGCC AGGTCGCGCA GCGCATGTTG ACAACGCGCC TGCGAGGAGT TCGGGAGGTG CTGGGATGA
|
Protein sequence | MKNEPGRLLI TGGSGFLGAR LVELALAQGW DVVATCHSRR PQTPGVRWET LDLRNAAATR RLVEQVTPDV VIHTAYRQEG PDMMAIIGEG SAAVAQGAFA VQARLIHLSS DVVFDGERIG RYTETDEPQP VTTYGAAKAL SERLVAAAHP GALIVRTSLI YGGPDRPGRH ERFVLDVLDG RAEAVFFTDE LRCPIEVGDL AAALLELATI DRSGIVHVAG SDVVSRYEFA CLVARAFGRD PSGLCGGLSP AAPRRPRNCA LDSQVAQRML TTRLRGVREV LG
|
| |