Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4598 |
Symbol | |
ID | 5211584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5762790 |
End bp | 5763749 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640598177 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001278879 |
Protein GI | 148658674 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.930375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGT ATATTGTGCG ACGGATACTT ATTGCCATTC CAACCTTGTT GATTATCAGT TTTGTGATTT TTGCCATTCT GGCGCTGGCG CCTGGCGATC CGCTGGCGCA GTTTGCGCTC AATCCGGCAA TTCCTGAATC GACGCGTGAG TTGATCCGTA TTCAGTTTGG TCTCGATCAG CCATGGTATG TGCGCTACGT GAAGTGGCTG ACCGCGCTGG CGCGCGGTGA TTGGGGGTTT TCATTCGGAA CGCGTGGTCC GGTGATCGAT CTGATCTGGC AGCGCCTGCC GCAGACGTTG ATTGTGGTGG GGACGGCGTA TCTGATTGCG GTGCTGATCG CCATTCCTAT CGGCGTGATC TCGGCAGTGA AGCAGTACTC CTGGTTCGAT CAGGTAGCAA CGTTCATTGC GTTCATCGGC TTTTCGGTGC CGTCGTTCTT CACCGGTCTG GCATTGATGC TGGTGTTTGC GATCAACCTG AAGTGGTTCC CGATCGTCTA TAATTCAACC CTTAATCTGG CAGGTTGGGA CGGAATCACC GAACAGATCC GCCAGATGAC ATTGCCGGTG ACGGTGCTGG TGGTGCAACA GACGGCGGCG TTGACTCGCT TTATGCGCTC ATCGATGCTC GATAACCTTC CGCTCGATTA TGTGCGCACC GCGCGCGCCA AAGGTCTGGC TGACCGGATG GTGATCATCC GCCATGTGCT GCGCAATAGC ATGATTCCGG TCGTGACGCT GATTGCGCTT GGTATTCCGA CCATTTTCGC CGGCGCGATT ATTACCGAGA ACCTCTTTCG CGTGAATGGC ATCGGTCAGT TGTTGATCAC GTCGATCCAG AACTCTGATA CGCCGGTCGT GATGGCAATC ACGTTTATTT TTGCCTGTCT CACCGTCTTT TTCAATTTGA TCGCCGATAT ACTCTACGGC GTGCTCGATC CCCGTGTGCG TTACAGTTAG
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Protein sequence | MAQYIVRRIL IAIPTLLIIS FVIFAILALA PGDPLAQFAL NPAIPESTRE LIRIQFGLDQ PWYVRYVKWL TALARGDWGF SFGTRGPVID LIWQRLPQTL IVVGTAYLIA VLIAIPIGVI SAVKQYSWFD QVATFIAFIG FSVPSFFTGL ALMLVFAINL KWFPIVYNST LNLAGWDGIT EQIRQMTLPV TVLVVQQTAA LTRFMRSSML DNLPLDYVRT ARAKGLADRM VIIRHVLRNS MIPVVTLIAL GIPTIFAGAI ITENLFRVNG IGQLLITSIQ NSDTPVVMAI TFIFACLTVF FNLIADILYG VLDPRVRYS
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