Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4567 |
Symbol | |
ID | 5211553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5725326 |
End bp | 5726225 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640598146 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001278848 |
Protein GI | 148658643 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGC AGGCAGAATT GCGACAACAG ACAGCAACGA GGCAACGAGA GCGTCATCAG CGCGCATTTG CTTTGCAGCA GCGTTGGCTC TGGCGCATCC TGGGATATGC AGCAATCGTG CTGTCGGTGA TCGTGATTGG CTTGCCGATC TACTGGATGC TGATCGCATC CTTCAAGACC AGTCGCGAGA TCTACACCGT CCCGCCAACC TGGATCCCGC TCAACCCCAC GCTGGACAAC TACCCCGCCG CCTGGCAAGC GGCGCCGTTT GCCCGCTACT ACCTCAACAG CATCATCGTC ACTCTGGTAA CGACTGTTTC GAAGATGACC CTGGCGGTGC TGACGGCGTA TGCGCTGGTG TTCCTGCGCT TCCCTGGCAA GAATATCGTC TTCCTGATCG TGCTCGCGGC GCTCATGGTG CCAGCGCAGA TCACGATTGT GCCAAACTTC CTGACAATGG GCGATCTTGG GCTGGTCAAT ACATACTGGG GGTTGATCCT GCCTGGTGCG GCGACGGCGT TCGGCACCTT CCTGATGCGC CAGTATTTTA TGACATTGCC GCGCGAAGTG TTTGAGGCAG CCGAGATCGA TGGCGCAGGT CATATGCGGC GTCTGTGGGC GATTGCGATA CCACTGGCGA TGCCGGCGCT GGTCACAACC GGTCTGTTCG CAGTCGTCAA CGAGTGGAAC GAATTTCTCT GGCCCCTGAT CATCACCAGC ACGGAAGACA TGCGCACCCT GCCGATCGGC GTGGCGCGCC TGCTCGATCA GGAAGGACTG GCGCGCTGGG GTGTGGTAAT GGCAGGTACG ATGTTCGTTG TACTGCCGGT TGTGCTGTTG TTCGTCTGGG CGCAACGCTA CATCGTCGAA GGTATCGCAG CCGGAGCAGT GAAGGGGTAG
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Protein sequence | MEQQAELRQQ TATRQRERHQ RAFALQQRWL WRILGYAAIV LSVIVIGLPI YWMLIASFKT SREIYTVPPT WIPLNPTLDN YPAAWQAAPF ARYYLNSIIV TLVTTVSKMT LAVLTAYALV FLRFPGKNIV FLIVLAALMV PAQITIVPNF LTMGDLGLVN TYWGLILPGA ATAFGTFLMR QYFMTLPREV FEAAEIDGAG HMRRLWAIAI PLAMPALVTT GLFAVVNEWN EFLWPLIITS TEDMRTLPIG VARLLDQEGL ARWGVVMAGT MFVVLPVVLL FVWAQRYIVE GIAAGAVKG
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