Gene RoseRS_4567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4567 
Symbol 
ID5211553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5725326 
End bp5726225 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID640598146 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001278848 
Protein GI148658643 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC AGGCAGAATT GCGACAACAG ACAGCAACGA GGCAACGAGA GCGTCATCAG 
CGCGCATTTG CTTTGCAGCA GCGTTGGCTC TGGCGCATCC TGGGATATGC AGCAATCGTG
CTGTCGGTGA TCGTGATTGG CTTGCCGATC TACTGGATGC TGATCGCATC CTTCAAGACC
AGTCGCGAGA TCTACACCGT CCCGCCAACC TGGATCCCGC TCAACCCCAC GCTGGACAAC
TACCCCGCCG CCTGGCAAGC GGCGCCGTTT GCCCGCTACT ACCTCAACAG CATCATCGTC
ACTCTGGTAA CGACTGTTTC GAAGATGACC CTGGCGGTGC TGACGGCGTA TGCGCTGGTG
TTCCTGCGCT TCCCTGGCAA GAATATCGTC TTCCTGATCG TGCTCGCGGC GCTCATGGTG
CCAGCGCAGA TCACGATTGT GCCAAACTTC CTGACAATGG GCGATCTTGG GCTGGTCAAT
ACATACTGGG GGTTGATCCT GCCTGGTGCG GCGACGGCGT TCGGCACCTT CCTGATGCGC
CAGTATTTTA TGACATTGCC GCGCGAAGTG TTTGAGGCAG CCGAGATCGA TGGCGCAGGT
CATATGCGGC GTCTGTGGGC GATTGCGATA CCACTGGCGA TGCCGGCGCT GGTCACAACC
GGTCTGTTCG CAGTCGTCAA CGAGTGGAAC GAATTTCTCT GGCCCCTGAT CATCACCAGC
ACGGAAGACA TGCGCACCCT GCCGATCGGC GTGGCGCGCC TGCTCGATCA GGAAGGACTG
GCGCGCTGGG GTGTGGTAAT GGCAGGTACG ATGTTCGTTG TACTGCCGGT TGTGCTGTTG
TTCGTCTGGG CGCAACGCTA CATCGTCGAA GGTATCGCAG CCGGAGCAGT GAAGGGGTAG
 
Protein sequence
MEQQAELRQQ TATRQRERHQ RAFALQQRWL WRILGYAAIV LSVIVIGLPI YWMLIASFKT 
SREIYTVPPT WIPLNPTLDN YPAAWQAAPF ARYYLNSIIV TLVTTVSKMT LAVLTAYALV
FLRFPGKNIV FLIVLAALMV PAQITIVPNF LTMGDLGLVN TYWGLILPGA ATAFGTFLMR
QYFMTLPREV FEAAEIDGAG HMRRLWAIAI PLAMPALVTT GLFAVVNEWN EFLWPLIITS
TEDMRTLPIG VARLLDQEGL ARWGVVMAGT MFVVLPVVLL FVWAQRYIVE GIAAGAVKG