Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4527 |
Symbol | |
ID | 5211512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5675940 |
End bp | 5677955 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640598105 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001278808 |
Protein GI | 148658603 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.436513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATTG CAGCAGATAT TGCCATTATC GTCGTTGCCG CACTGATCGG CGGGTTTGTG GCGCAGCGGT TTGGTCAGCC GCTCATTTTG GGGTACATTC TCGCTGGCGT GGTTGTGGGT CCCCATACCG GCGGTATTAC CATCAGCAAT ATCCATGATA TCGAATTGCT GGCGGAAATT GGTGTGGCGC TGCTCCTGTT TGCCCTGGGA CTCGAATTCA ATCTGAACCG TCTTGGTAAA GTGCGCGCTA TTGCGCTCGC CGGTACGACG ATTCAGATCC TGGTGACGAT GGTGTTCGGG TTTGGTGTCG GGCAGTTGCT CGGTTGGCCC GCGTATGAAT CGCTCTGGTT TGGCGCAATT GTGGCACTTT CGAGCACCAT GGTCATTCTC AAAACGCTGC TGGAGCAGGG GCGGCTCGGT TCGCTGGCAG GGCGCATTAT GATGAGCATG CTGATCGTCC AGGACCTGGC GGTTGTTCCG ATGCTCATCA TCCTGCCAAC CTTGCAAGAC CCGGCAGCTG GGCTGACGAC GCTCGCGTGG GCGGTTGTGC GTGCGGCGCT CTTCCTTGCC TTAATGATCT ACGGCGGCAC ACGCCTGATC CCGGTGGTTC TGCAGCGGAT CGCCGCCTGG AATTCGCGCG AACTCTATTT GATCGCAGTC GTTGCTATCG GTCTTGGCGT CGGGTATGCG ACTTATCTGG CAGGGCTGTC GTTTGCGTTT GGCGCATTTG TTGCCGGGAT GGTGCTAAGT GAGTCGGAGC ACAGTCATCA GGCGCTCAAT GACATCGGTC CGCTCCGTGA TCTGTTTGGC TTGTTGTTCT TCGTTTCAAT CGGTATGCTG ATCGATCCGG CGTTCCTGAT CGACCATCTG GGAATTGTGT TGCTGGTGGT TGCGCTGGTT GCGTTTGGGA AAATGCTGAT CTTTGGCGTG ATCTCGCGCG CTTTTGGATA TACTGATGGT ATTCCGATCC TGGTTGGGCT GGGCATGTTT CAGATTGGCG AGTTTGCCTT CGTGCTGGCG GAAGTTGGTC TGAATGCCAG CGCCATTCGT CAGGAAACAT TCACCCTCGT TCTGGCGACG GCAGTTGTGA CGATGGTGTT GACGCCATTC GCGGTGCGTG GCGCCGATAC GCTGTCAGCG CGTCTGCGAC GCACCCGCGC TACGCTCGAA GCACACCTGG CTGCGGAACA GCCATTGCGT GATCATATTA TCATTATCGG CTACGGGCGC GTCGGACGGT ATACCGCCGA AATCCTGCAA CAACTCCAGT TGCCGTGCGT GGTGATCGAT CAGGACTACA ATGCGGTCGA GCGGGCGAAG AAGGCAGGGT TGCCGGTGAT CTACGGCGAT GGCGCCAGTC CGGTCGTGCT GGAAGCGGCT GGTCTGATGC ATGCGCGCCT GGTGCTGGTC GTCGTCGCCG GGGGGGTCGA TGTTGAGCAG GTAGTGCGTC AGGTGCGCCG GTTGAATGCA ACCGTGCCAC TGGTTGCGCG TGCGGCGAAT GTGGCGCAGA TCGAAGAATT GCAACCGCTT GGGGTGGACG AAATTGTGCA ACCGGAGTTC GAGGCGGGCA TCGAAATGGT GCGCCAGGCG CTGTTACGCT GCGATGTGCC GCCGGAGGCG ATCGATACGT TGAGCGATGC CGTGCGCATC CAGGGGTATC GTCCGCTCCG TTTGCCGGGG CAGGAAGAGG TGTTGCTGCG GCTGCTGCGT CAGTCTGCCG CAGCGACCAG TCTTGCCTGG ATGACGGTCG AAGCCGGGTC GCCGCTCGAC GGAAAGACGA TAGGGGAGAA CCACATCCGC TGGCGCACCG GCGCCACCAT TGTTGCTATC GAGCGCGGAT CTGCGGTGAT TGCCAATCCC GGCGCCGAAG CGCTTCTGCT TGCTGGCGAC CGGCTGGCTG TGTGGGGAAC GCTCGAACAG CGCCGGGCGG TGCATGCGCT CTGCACGAAA ACGGACGCAG TTGGGGTGAC GCAGCAGGTC CCCCTTCGCG CGCCGGTCGA AATTGATGCG TGTTGA
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Protein sequence | MGIAADIAII VVAALIGGFV AQRFGQPLIL GYILAGVVVG PHTGGITISN IHDIELLAEI GVALLLFALG LEFNLNRLGK VRAIALAGTT IQILVTMVFG FGVGQLLGWP AYESLWFGAI VALSSTMVIL KTLLEQGRLG SLAGRIMMSM LIVQDLAVVP MLIILPTLQD PAAGLTTLAW AVVRAALFLA LMIYGGTRLI PVVLQRIAAW NSRELYLIAV VAIGLGVGYA TYLAGLSFAF GAFVAGMVLS ESEHSHQALN DIGPLRDLFG LLFFVSIGML IDPAFLIDHL GIVLLVVALV AFGKMLIFGV ISRAFGYTDG IPILVGLGMF QIGEFAFVLA EVGLNASAIR QETFTLVLAT AVVTMVLTPF AVRGADTLSA RLRRTRATLE AHLAAEQPLR DHIIIIGYGR VGRYTAEILQ QLQLPCVVID QDYNAVERAK KAGLPVIYGD GASPVVLEAA GLMHARLVLV VVAGGVDVEQ VVRQVRRLNA TVPLVARAAN VAQIEELQPL GVDEIVQPEF EAGIEMVRQA LLRCDVPPEA IDTLSDAVRI QGYRPLRLPG QEEVLLRLLR QSAAATSLAW MTVEAGSPLD GKTIGENHIR WRTGATIVAI ERGSAVIANP GAEALLLAGD RLAVWGTLEQ RRAVHALCTK TDAVGVTQQV PLRAPVEIDA C
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