Gene RoseRS_4437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4437 
Symbol 
ID5211422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5560442 
End bp5561437 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content54% 
IMG OID640598016 
Productglycosyl transferase family protein 
Protein accessionYP_001278719 
Protein GI148658514 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.749326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAC TCCTATCAAC CGTCATCGTT AACAGTGACG GATGCGCCGA TACGCTGCGT 
TGCCTGGAGT CACTTTTCGC TCATCCGCCG GATCTCGCGA CACTCGCCCG GCTCGTTGAC
GCTCTCCCAG AGCACGAAAT CATTCTGGTC GATAATCGGT CACGCGATGG ATGCGTGGCG
CAGGTGCGTG AACGCTTTCC TTCAGTGAAG ATTATCGAGT CTCCGACACG CCAGGGATTT
TCCCGGAATT ACAATCTTGG CATTCGACAG ACGAGCGGGG TATTTGTTCT GGTGCTCAAT
AATGATACGC TCGTGCATCC CGGCGCTTTG ACAACACTAC TGAACGTCAT GATCGAAACT
CCATCATATG GGATGGCAGG TCCGCGTCTA GTCGGGCGCG ATGGATGGGT GCAGGCAGTT
TGTGCACGTC CAGTTCTGAC GCCTCGGGAG TATCTCCTGA CGCAATCGAT CGCTGATCCT
GGTTTTCCAA TAGGACGACT ATGGCTGTTG TATCAGCAGA TGAGCGTCGC GCGTCGGCGG
AGTGGTCTGG CGCCGTGCAT CAGCGGCGCA TGTATGCTGG TGCGGCGGAC GGCTTTTGAG
CAGACCGGGC TTTTCGATGA AGCGGTCGAT TTCTACTACG AAGATATTGA ATGGTGTCAT
CGCATGGCAT GTTATGGCTG GCAGGTGGGG TATGTCGCAG AGGCGACTAT TACGCATATC
GGGGATCAAT CGATCAGCAA AGTCAAAGTC TGGGCAAAAC AGAGCGAATA CTTCAGTGCA
CTGCGCTACT TTCGTCGCTA TCATCACCTT ACCGACCAGG ACGCTCGTGT TCTGCGCATT
GTGACCTCGT TTGGATGGTT GATGCGAGGA ATTACGTTCT TACTCGCTGA AGGATTGTTT
GGATACAAAG GGCATGCCCG CGCCTATCTC TATCTCTGGA AATGGATTTT GAGCGACCCT
TCCGCAGATG GTACGCAGGC GCAGAGGAAG CAATGA
 
Protein sequence
MRPLLSTVIV NSDGCADTLR CLESLFAHPP DLATLARLVD ALPEHEIILV DNRSRDGCVA 
QVRERFPSVK IIESPTRQGF SRNYNLGIRQ TSGVFVLVLN NDTLVHPGAL TTLLNVMIET
PSYGMAGPRL VGRDGWVQAV CARPVLTPRE YLLTQSIADP GFPIGRLWLL YQQMSVARRR
SGLAPCISGA CMLVRRTAFE QTGLFDEAVD FYYEDIEWCH RMACYGWQVG YVAEATITHI
GDQSISKVKV WAKQSEYFSA LRYFRRYHHL TDQDARVLRI VTSFGWLMRG ITFLLAEGLF
GYKGHARAYL YLWKWILSDP SADGTQAQRK Q