| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4409 |
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| Symbol | |
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| ID | 5211394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5526545 |
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| End bp | 5528407 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597989 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001278692 |
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| Protein GI | 148658487 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.543078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCA TGACAACGAC CAACGATTTG CTCCAGCAAG GTATTGCGGC AGCGCGCTCC
GGACAGCGCG CCCTGGCACG GCAACTCTTC GTTCGCGTCA TCCAGGCGGA TCAGTACAAC
GACGAGGCGT GGGTCTGGCT TGCAGGTGTG GTGGATGACC CTGCTGATAT GCGGCGCTGT
CTGCAGCAGG CGCTGCGGAT CAATCCGTTG AACCCACATG CGCGTCAGGG AATTGCGTGG
CTCGATCAAC AAGCAAGGCA GGCGCAGAAG ACCTCATCAT CCGCAGGCGC CCCGCCTGAC
GGTCAGGCAT CATCGGTGTC CCCATCGTCT ATGGCGCGTC CGACGCCGTC CCAGGAAGCG
AATCAGCCGC CACAGGCATC GTCTGATGCA GATCGAGGGC TTTTCCAACT GCCCCCTGCG
ACGAACGGTC CGTCGCCAGC ATCTCAGTCG AGCGCGTCGG CAAAACCGGC ATCCGCTCGC
GACTCTCGCC TGTCTGACAG TCCTGCGTCT GCTGCTGGCA AAACGTCCGC TGACGGAACC
GTTGAAAAGC CTGCTCGTCG TTTCTCGCTC TTCGGCAAGC CCAAACCTAC TCCCGCTGCC
GCCGCCCCGT CCGACGCCCC GCGTCCAGCC AACCAACCCG CCCGCCGCTT CGCCCTCTTC
GGCAAGCCCA AACCCGCCGC CGACGCTCCC GCTCCCGCGT CCGACGCCCC GCGTCCAGCC
AACCAACCCG CCCGCCGGTT CGCCTTCTTC GGCAAACCTG AACCCGCCGC CGACGCCGCC
AGCGCTGCTC CAGCACCCAA CACCGCCCAA CCGACAGACC AACCCGCCCG CCGGTTTGCG
CTCTTCAGCA AGCCCAAACC GACCGCTGCC GCAATGGTCG CCACGGCAGC GGCTGGCGCA
GCAGGCGCGA CAATGACTGC ACCGGTTGCC ACACCAGCGC CGAAATCACG CCGGAAAGAG
AAAGAACTAC CACCAGAGGA AGGCGACCCC ACGCGCGACC GCTGCCCGTA CTGCGGCGAA
CTGAACAAGC CGGATCGGGC ATGGTGCCGC CGTTGCGACC GCAGCCTGAT GATTCGCGGT
CCGGCGCGCG CGCAGCGTTC TCCCTGGCTG TCGATCCTTG GCATTCTGTG GGTTCTCGGC
GGCGTGTTGG GGATTCTGGG GGCTATCGCA GGGTTGATTG GCGCGCTCGT GTTGTACAAC
TCGGTGAGGG GCAGTCTTTC CGATTTTCCG CTCATCATTG TGGTGGTCTG TGTGATCATC
GCCCTGGTCT ATGGGGGGCA AATTGCGATT GCGCGCGCAA TGCTGAACCG CGCCCGTTGG
GCATACTGGA TTATTGCCGT ACTGACCGCG CTGCAACTCG GCGGATCGCT GCTTGGCGCG
CTCGGCGCCG CTGCGACAAT CCGCGACGCC ATCGCTCAGG CACAGGCGCT TCTGCCTTCA
TCAGAAGCCG CAACTGCTGC CGCTGCGGTC ACCGGCATCT TTGGGACAGT TGTGCTGATC
GATGTTGGCA TCAAGGCATT CTTTATGCTG CTGGTCGGGT TGAGCTGGCG CGATTTCTAC
GGACCCAAGG AGCGTTTCGT TTCTGAGGTA CACGGCTCGA CCGACTACGA ACTGTTCAAC
ACCGGTCTGG CGCTGCAGCG CAAAGGCATG TGGTGGATGG CGATGAAACA GTGGGAGGCG
GCAGTCGCCA ATTCGCCACG TGATACCGAT TACCTCCACG CACTGACGGT CGCCTATGCG
AAACTTGGCG AATGGGAGAA GGCGCGCGAA ACTATCGCAA AGGCGATCAA AGTCGCCCCC
GATAACCCGG CGCTGAAACA GGTTCAGGAG CGGATTGAAC GCACAATTGC AGCACAGGGG
TGA
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| Protein sequence | MPFMTTTNDL LQQGIAAARS GQRALARQLF VRVIQADQYN DEAWVWLAGV VDDPADMRRC
LQQALRINPL NPHARQGIAW LDQQARQAQK TSSSAGAPPD GQASSVSPSS MARPTPSQEA
NQPPQASSDA DRGLFQLPPA TNGPSPASQS SASAKPASAR DSRLSDSPAS AAGKTSADGT
VEKPARRFSL FGKPKPTPAA AAPSDAPRPA NQPARRFALF GKPKPAADAP APASDAPRPA
NQPARRFAFF GKPEPAADAA SAAPAPNTAQ PTDQPARRFA LFSKPKPTAA AMVATAAAGA
AGATMTAPVA TPAPKSRRKE KELPPEEGDP TRDRCPYCGE LNKPDRAWCR RCDRSLMIRG
PARAQRSPWL SILGILWVLG GVLGILGAIA GLIGALVLYN SVRGSLSDFP LIIVVVCVII
ALVYGGQIAI ARAMLNRARW AYWIIAVLTA LQLGGSLLGA LGAAATIRDA IAQAQALLPS
SEAATAAAAV TGIFGTVVLI DVGIKAFFML LVGLSWRDFY GPKERFVSEV HGSTDYELFN
TGLALQRKGM WWMAMKQWEA AVANSPRDTD YLHALTVAYA KLGEWEKARE TIAKAIKVAP
DNPALKQVQE RIERTIAAQG
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