| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4397 |
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| Symbol | |
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| ID | 5211382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5511861 |
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| End bp | 5514359 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640597977 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001278680 |
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| Protein GI | 148658475 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTG TGGTCATGGC TGGCGGTGAG GGATCGCGTT TGCGCCCGCT CACAATCAAC
CGCCCGAAAC CCATGGTGCC CATTGTTGAT CGCCATGTTC TGGCACATAT CATCGAGTTG
TTGAAACGGC ACGGCATCAC TGAAATTGTG ATGACCGTTC AATATCTGGC AAATGTTATT
CAGGATCATT TTGGCGATGG ATCGGCATAT GGCGTACATA TCGAGTATTC GCTCGAAGAA
CAGCCGCTTG GCACAGCTGG CAGCGTCAAG AATGCCGAAC GTCTTCTCCG CGAGCCTTTT
CTGGTCATAT CCGGCGATGC GCTGACCGAT TTCGATCTGA GTAAAATCAT CGAATTTCAT
CGCAGCAATG GCGCTACTGC GACCATTACC CTGACCCGCG TGCCCAATCC GCTCGATTAT
GGCGTCGTGG TGGTGGATGA ACGCGGGTAT GTGCGTCAGT TTCTCGAAAA GCCGAGTTGG
GGCGAGGTTT TTTCTGATAC GGTCAATACC GGCGTCTATG TCGTCACTCC GGAGATTTTC
CGCTATATCG AAAAAGGTGC ATTCACCGAC TGGTCGAAGG ATGTCTTTCC CAGGATGTTG
CGCAGCGGCA ATATTCCGAT CGGCTATGTC GCCGAGGGAT ACTGGACGGA CATCGGCACC
ATTGAAGAAT ACATGCGCGC CAGCCGCGAC TATATGCAGG GCAGGGTCAA TCTGCCGCGC
GTCGGCGAAC GCATCTTCGA TGAGGTATGG GTTGAGGGGG ATGTGGAGAT CGCGCCCGAC
GCACAGTTCC ACGGCCCGGT GTTCCTGGGG CATGGCGTCA AGATCAAGGG CGGCGTCATC
ATCCACGGTC CTTCGGCTAT TCGTGACTAT ACCATTATCG ACACACGCGC AACGATTGAT
CGGTCGATCA TCTGGCGCAA CTCGTACATC GGCGAACGCG CTGAACTGCG CGGCGCCATC
GTGATGCGGC AGTGCAATAT CAAAAGCCGC GCCGTACTGT TTGAGGGGTC GGTGGTTGGC
GACCAGACGA TTATCAATGC TGGTGCGGTT ATCGGTGCAA ACGTCAAAAT CTGGCCCAGC
AAAGAAGTTG AGGAAGGCGC AACAATCAGT TCCAGCATCA TCTGGGGGTC GCAGGGACGT
CGCGTACTGT TCGGTCGGTC AGGAATATCG GGGCTGGTCA ATATCGACCT GACGCCGGAG
TTCGGCGCGC GGCTCGGCGC CGCCTTCGGC GCTACGCTGC CACGTGGCGC CGTGGTGACG
ACCAGTCGCG ATACGCACTA CACGCCGCGC ATGATTAAGC GTGGATTGGT CGCTGGACTG
CCGTCCGCCG GGGTACACGT CGCCGAATTG CACGATGTGC CGCTGCCGGT CGCACGTGTC
ATCACGAAGG CGATCAATGC TGCTGGCGGC GTTCACGTTC GCCTGTCGCC ACTCGATAAT
CGCGTCGTAG ATATCAAGTT TTTCGATGCC GATGGTCTTG ATATTGATAC CGCCACCGAG
CGCAAGATCG AAGGGATCTT TTTCCGTGAA GATTACCGGC GGGTCTATCT CGACGAAATT
GGGCGCATCA ACGAGGTTGA GCATATCAAT CAGATCTACA CCGACATGTT CCTTGGCGCG
TTGCGTCCTG ATGCGCTTGC CAGCATTGCG CGCAATTTTC AACTGGTGAT CGATTACGCC
AACGCGAACA CGTCAAACTT CCTGCCAGCG ATTCTCCGTC GCCTGCACAT CGAAGCGGTC
GAACTGAATG CCAACCTCGA TGCGCAACTG CTCTTCCAGA CGCCGCAACA GTTCGAGGCG
GGCATGGAAC GGCTGGCGCG CATCACGCCG GTGCTCGAAG CGTCACTGGG CGCCCGGCTC
GATGCAGGCG GCGAGAAACT CTTCCTGGTA GACGACACCG GACGACGCCT GCCAGGGATG
CAGGCGCTGG CGGCGGTTAC CGCGCTGGCA ATGGCGGTCA ACGGCGGCGG CGCTGTTGCA
GTGCCGGTGA CGGCGCCACG CGCATTTGAA GTCATAGCAG CCCGCTACGG CGGTCAGATC
GTGCGCACCC GCGCCACGCT TGGCGCGCTG ATGAGAACGG CAGCCGCTCA TCGCGACATG
TTATTGCTCG GCGATGGCGC CGGCAACCTG ATCTTCCCCT CGTTCTACCC CATTGCCGAC
GGTATGTTCG CCATCGTCAA GATCGTAGAG TTGCTGGCGC TGCAACAGGT GCGTCTGTCG
GAGATCGTGC GCGATCTGCC GCACTATTTC ATGAGCCAGG CGCGCGTTCC CTGCCGCTGG
GAGTTCAAGG GCAAGGTCAT GCGCATTTTG AACCAGCAGT ATCAGGATCG CAAACTCGAT
CAGGTTGATG GCGTAAAAAT CGATCTTGGC GATGAGTGGG TCTTGATCCT GCCCGATCCC
GATGGTCCCT TCTTTCACGT CATTGCCGAA GGCAGCAGCG ATGAACAGGC GCGGGTGCTG
GCGGAGAAGT ATGCCGGGTT GGTGACCGGC TTACAGTAA
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| Protein sequence | MKAVVMAGGE GSRLRPLTIN RPKPMVPIVD RHVLAHIIEL LKRHGITEIV MTVQYLANVI
QDHFGDGSAY GVHIEYSLEE QPLGTAGSVK NAERLLREPF LVISGDALTD FDLSKIIEFH
RSNGATATIT LTRVPNPLDY GVVVVDERGY VRQFLEKPSW GEVFSDTVNT GVYVVTPEIF
RYIEKGAFTD WSKDVFPRML RSGNIPIGYV AEGYWTDIGT IEEYMRASRD YMQGRVNLPR
VGERIFDEVW VEGDVEIAPD AQFHGPVFLG HGVKIKGGVI IHGPSAIRDY TIIDTRATID
RSIIWRNSYI GERAELRGAI VMRQCNIKSR AVLFEGSVVG DQTIINAGAV IGANVKIWPS
KEVEEGATIS SSIIWGSQGR RVLFGRSGIS GLVNIDLTPE FGARLGAAFG ATLPRGAVVT
TSRDTHYTPR MIKRGLVAGL PSAGVHVAEL HDVPLPVARV ITKAINAAGG VHVRLSPLDN
RVVDIKFFDA DGLDIDTATE RKIEGIFFRE DYRRVYLDEI GRINEVEHIN QIYTDMFLGA
LRPDALASIA RNFQLVIDYA NANTSNFLPA ILRRLHIEAV ELNANLDAQL LFQTPQQFEA
GMERLARITP VLEASLGARL DAGGEKLFLV DDTGRRLPGM QALAAVTALA MAVNGGGAVA
VPVTAPRAFE VIAARYGGQI VRTRATLGAL MRTAAAHRDM LLLGDGAGNL IFPSFYPIAD
GMFAIVKIVE LLALQQVRLS EIVRDLPHYF MSQARVPCRW EFKGKVMRIL NQQYQDRKLD
QVDGVKIDLG DEWVLILPDP DGPFFHVIAE GSSDEQARVL AEKYAGLVTG LQ
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