| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4362 |
|---|
| Symbol | |
|---|
| ID | 5211346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5481459 |
|---|
| End bp | 5482226 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640597943 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278647 |
|---|
| Protein GI | 148658442 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.144565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGTC ACTCGAAATG GCACTCAATA CGGCGCACGA AGAGCGTGCT CGATCAGCGG
CGCGGGCAAC TCTTCACCAA ACTGGCGCGC GATATTACGA TTGCAACGCG CGAGGGAGGC
AGCGGCGACC CCGAAGCAAA TTTTCGCCTG CGCCTGGCAG TTGATAAAGC GCGCGCCGCC
AATATGCCGA TGGAGAACAT TCAGCGCGCT ATTGATCGCG GCCTGGGCAA AGGTGGCAGC
GATGCCGCTG CGATTGAAGA GATCTACTAC GAAGGGTACG CCCCTGGCGG CGTGGCGCTC
TTAATCGAAG CCGCCACCGA TAATCGCAAC CGCACCGCTT CTGACGTGCG CGCAACCATG
ACGAAGAATG GCGGTAGCCC CGGCGAACCA GGTTCAGTCA GCTGGATGTT CGAAACCAAA
GGGCTGATCA CCATCGATCT GTCGGTCAAA CGCCTCGATC CAGATGAAGT GATGCTGATT
GCCATCGACG CTGGCGCAGA AGACGTACAG ATCGACGACG ATATCGTTGA GGTGTACACC
GATTTCAAAC AACTCGCCGC AGTGCGTCAG CACCTGATCG CCGCCGGGCT GCCGGTGACC
GGCGCCGAAA AGACCATGAT CGCCAAAACG ACGGTGCAGC CTGATACCGC CGATGCGCTC
AAGGCGATGA AACTGATCGA GAAACTGGAA GACCTCGACG ATGTGCAGAA GGTCTACAGC
AATCTGGATA TCACCAGCGA ACTGGCGGAA CAGTTTGTGC AGGGTTAA
|
|---|
| Protein sequence | MSGHSKWHSI RRTKSVLDQR RGQLFTKLAR DITIATREGG SGDPEANFRL RLAVDKARAA
NMPMENIQRA IDRGLGKGGS DAAAIEEIYY EGYAPGGVAL LIEAATDNRN RTASDVRATM
TKNGGSPGEP GSVSWMFETK GLITIDLSVK RLDPDEVMLI AIDAGAEDVQ IDDDIVEVYT
DFKQLAAVRQ HLIAAGLPVT GAEKTMIAKT TVQPDTADAL KAMKLIEKLE DLDDVQKVYS
NLDITSELAE QFVQG
|
|---|
| |