| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4356 |
|---|
| Symbol | pgi |
|---|
| ID | 5211340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5473413 |
|---|
| End bp | 5475044 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640597937 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_001278641 |
|---|
| Protein GI | 148658436 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.099888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTC TGACGCACCG CCCTGAATGG CGCGCGCTCG AGACGCACTA TCACGCGATA
TGTAACGTGC ATCTGCGCCA GTTGTTTGCT GAAGACCCTG GTCGCGGCGA GCGCCTGACC
GCCGAAGCCG CTGGACTTTT CTTCGACTAT GCGAAAAACC GGATCACCGA CGAGACGCTG
CGCCTGCTGA TCGCGCTGGC GGAGGCATGT GATCTGCGCG CCAGAATCGA TGCAATGTTC
CGTGGCGAAC GGATCAACGC CACCGAGAAC CGCGCCGTTC TTCACGTGGC GCTCCGCGCG
CCGCGCGGCG CTGTTATTCT GGTGGATGGC GCAAATGTAG TCCCTGAAGT GCATGCAGTG
CTTGATCGCA TGGCTGCGTT CGCCGAACAG GTGCGCAGCG GCAGGTGGAC CGGGTTCACC
GGCAAACCGA TCCGCAACAT TGTCAATATC GGCATCGGCG GATCCGACCT GGGACCTGTG
ATGGCGTATG AGGCGTTGCG GTACTACAGT GACCGCAATC TGACCGTTCG CTTTGTGTCG
AACGTCGATG GGAGCGATTT TGCCGAGGCG ACCCGTGATC TCGATCCGGC GGAAACCCTG
TTCATTGTGG CGTCGAAAAC GTTCACCACA CTGGAGACAA TGACCAACGC GCGCACTGCG
CGCGCCTGGG CGCTGGCGGC GCTCGGCGAC GAGGCTGCGG TTGCACGTCA TTTCGTCGCC
GTTTCGACTA ATGCCGCCGA GGTGGCGAAG TTCGGCATCG ACACGGCGAA TATGTTCGGC
TTCTGGGATT GGGTTGGCGG ACGGTACTCA ATGACATCGG CAATCGGGCT GTCAACCATG
ATCGCGCTCG GTCCTGAACG GTTCCACGAA CTGCTCGCCG GCTTCCACGC GATGGACGAG
CACTTCCGCA CGGCGCCGTT CGACCGTAAC CTGCCGGTGA TCCATGGACT GCTGACTATC
TGGTATGCCA ATTTCTTCGG CATCGAGACG GTGGCGATTC TTCCCTACGA CAATTACCTG
AAACGTTTTC CGGCATACCT CCAGCAACTG ACGATGGAAA GCAACGGCAA ATCGGTGACA
TTGTCCGGCG CGCCGGTCTC GTATCAGACG GGAATGATCT ATTGGGGCGA GCCGGGAACG
AATGGTCAGC ACTCGTTCTA TCAGTTGCTC CACCAGGGCA CACGCCTGGC GCTGTGCGAT
TTCATCGGTT TTGCCGAACC GCTCAATCCG CTCGGCAACC ATCATGATCT GCTGATGGCG
AATATGTTTG CGCAGGCTGA GGCGCTGGCG TTCGGCAAAA CAACGGAGGA GACGCTGGCG
GAAGGAACGC CGGAGTGGCT GGCGCCGCAC CGAACCTTCG CCGGTAATCG TCCATCGAAC
ACGCTCCTGG CGGAACGGTT GACGCCAGCA ACACTCGGCG CGCTGGTCGC CCTGTATGAA
CATAGCGTGT TCACCCAGGG TGCAATCTGG GACATCAATC CATTCGACCA GTGGGGCGTC
GAGTTGGGGA AGGCGCTGGC AGGGCGCATT GTCCCTGAGT TGATGAGTGA GTCCGCCCCA
CACCTGGCAC ACGACAGTTC AACAAATGCG CTCATCCGGC GCTACCGCAC CCTGCGCGGG
CGGGTCTCAT AG
|
|---|
| Protein sequence | MTVLTHRPEW RALETHYHAI CNVHLRQLFA EDPGRGERLT AEAAGLFFDY AKNRITDETL
RLLIALAEAC DLRARIDAMF RGERINATEN RAVLHVALRA PRGAVILVDG ANVVPEVHAV
LDRMAAFAEQ VRSGRWTGFT GKPIRNIVNI GIGGSDLGPV MAYEALRYYS DRNLTVRFVS
NVDGSDFAEA TRDLDPAETL FIVASKTFTT LETMTNARTA RAWALAALGD EAAVARHFVA
VSTNAAEVAK FGIDTANMFG FWDWVGGRYS MTSAIGLSTM IALGPERFHE LLAGFHAMDE
HFRTAPFDRN LPVIHGLLTI WYANFFGIET VAILPYDNYL KRFPAYLQQL TMESNGKSVT
LSGAPVSYQT GMIYWGEPGT NGQHSFYQLL HQGTRLALCD FIGFAEPLNP LGNHHDLLMA
NMFAQAEALA FGKTTEETLA EGTPEWLAPH RTFAGNRPSN TLLAERLTPA TLGALVALYE
HSVFTQGAIW DINPFDQWGV ELGKALAGRI VPELMSESAP HLAHDSSTNA LIRRYRTLRG
RVS
|
|---|
| |