| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4348 |
|---|
| Symbol | |
|---|
| ID | 5211332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5464182 |
|---|
| End bp | 5465372 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640597931 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001278635 |
|---|
| Protein GI | 148658430 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.430233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0132867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA ATGGACGCGA CGTAGTGGTG CTGAGTGGTG TCCGCACCGC GATCGGCAAT
TTTGGCGGCA GTCTCAAGGA TCAACCGCCG AGCGAACTGG CGGCGCAGGT CGTGCGTGAA
GCGGTCAGGC GCGCGGGTGT CGAGCCGACG GAAATCGGGC AGGTTGTGTT TGGTAATATC
ATCCACACCG ACGGGCACGA CCACTATCTG GCGCGGGTTG CAGGGGTCAA GGGCGGCTTG
CCGGTGGACG TTCCGGCGTT GACGTTGAAT CGCCTGTGCG GCAGTGGCTT GCAGGCGATC
ATCTCGGCAG CGCAGACAAT CATGCTCGGC GATGCCGATG CCGCCGTCGC TGGCGGCGCC
GAGTCGATGA GTCGCAGCCC ATACTGGGCG CATGCGATGC GCTGGGGCGC GCGGATGAAT
GATGTTGCGA TGGTCGATGC AATGGTAGCG GCGCTCAGCG ATCCGTTCGA TGATGTGCAC
ATGGGCGTAA CAGCTGAGAA TGTCGCCCGG AAGTGGGAGA TTACTCGCGA GGATCAGGAT
GCGCTGGCTG TTGAAAGTCA TAAACGCGCT GCCGCTGCCA TTGCGGAAGG GCGTTTCAAG
GATCAAATTC TGCCCGTTGA GATCAAGGTC AAGGGCGGGG TTCAGATGTT TGATACCGAT
GAAAGCGTGC GCCCTGACAC AAGTCTTGAG AAGCTTGCCA AACTGCGTCC GGTCTTCGAC
AAGCAGGGAA CCGTGACCGC CGGTAATGCA TCGAGCATCA ATGATGCTGC GGCTGCTGTG
GTGTTGATGG AACGCAGTGT TGCCGAACAG CGCGGCTACA AACCGATGGG TCGTCTGGTG
GGGTACAGCG TTGTCGGCGT CGACCCGAAG TATATGGGCA TCGGTCCGGT TCCGGCAGTG
CGCAAGGTGT TGGAGCGCAC CGGACTGAGC ATCGATGACA TCGATCTGTT TGAACTGAAC
GAGGCGTTCG CGGCGCAGGC GCTCGCCGTC ATCCGCGAGC TTGATCTACC AATGGAGAAG
GTCAATCCGA ACGGCAGCGG CATTTCGCTC GGTCACCCGA TTGGCGCAAC CGGCGCGATA
CTGACGGTGA AGGCGCTCTA CGAGCTGCAA CGCACCGGTG GTCGCTACGC CTGCGTCACC
ATGTGCATCG GCGGCGGTCA GGGCATCGCT GCGATCTTCG AGCGGATATA G
|
|---|
| Protein sequence | MTANGRDVVV LSGVRTAIGN FGGSLKDQPP SELAAQVVRE AVRRAGVEPT EIGQVVFGNI
IHTDGHDHYL ARVAGVKGGL PVDVPALTLN RLCGSGLQAI ISAAQTIMLG DADAAVAGGA
ESMSRSPYWA HAMRWGARMN DVAMVDAMVA ALSDPFDDVH MGVTAENVAR KWEITREDQD
ALAVESHKRA AAAIAEGRFK DQILPVEIKV KGGVQMFDTD ESVRPDTSLE KLAKLRPVFD
KQGTVTAGNA SSINDAAAAV VLMERSVAEQ RGYKPMGRLV GYSVVGVDPK YMGIGPVPAV
RKVLERTGLS IDDIDLFELN EAFAAQALAV IRELDLPMEK VNPNGSGISL GHPIGATGAI
LTVKALYELQ RTGGRYACVT MCIGGGQGIA AIFERI
|
|---|
| |