| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4332 |
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| Symbol | |
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| ID | 5211316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5444463 |
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| End bp | 5445437 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640597916 |
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| Product | CRISPR-associated Csd2 family protein |
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| Protein accession | YP_001278620 |
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| Protein GI | 148658415 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000155089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.180837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CACTCTCGAA AAAGATCGAC TTCGCCGTCA TCCTGTGTGT CAGGAATGCC
AACCCGAATG GCGATCCGCT CAACGGAAAT CGCCCTCGCA CCACCTATGA AGGGCTTGGT
GAGATTTCCG ATGTCGCGAT TAAGCGCAAG ATTCGCAATC GCGTGATGGA ACTGGCAAAA
GAGATAGAAA GGATCAAGGA GGAAGAAAGA ACAGAGGCCC AGAAGCAGGC TTACGAACGG
CTCAAGGGTG TAGAGCATCC AATATTCGTT CAATCTGATG ATAATCGGAA CGATGAATAT
ACCAGTCTAC GTGAGCGTGC CGAGGCGTAT CTCAAGGATT TCATGAATGA CAGATCGGCG
TATCAGAAGA AAGCCTGCGA AACCTGGTTT GATGTCCGTG CCTTTGGGCA GGTGTTTCCT
TTCAAGGGGA AGGGAAAAGG CAAGAAGGGC GATAAGAGTA ATGAAGGTGA AGAGAGCGAT
GGCGTCTCGA TTGGGATTCG CGGTCCGGTA TCGATCCATC CCGCCTTCTC GGTTGTCCCT
GTTCTCGACC GCGTTTCCAG CATTCAGATC ACGAAAAGCG TGAGCAACGA ACCTGGCGAA
AAGCGCGGTT CTGATACGAT GGGCATGAAG CATCGCGTTG ATCACGGCGT GTACGTCTTT
TATGGCAGCA TTAACCCGCA ACTGGCGAGC AAAACCGGCT TCTCAGACGA TGATGCAGCA
GTTATCAAGG AGGCATTGCG GACGCTGTTC CGTAATGACG CTTCCTCTGC CCGTCCTGAG
GGTAGCATAG AAGTTTACAG GGTCTACTGG TGGAAGCACA ACAGCCCGAA TGGACAGTAT
TCCTCGGCGA AAGTACATCG TTCGCTGAGA GTTCGGGTTA GGGATGGGAT TGAAGATCCG
AAGAGTATTG ACGACTACGT GATCGAGCTT CAAGACCTCG ACGGTTTGAA GCCCGAAGTT
ATTGAGGGTG AATAG
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| Protein sequence | MTTTLSKKID FAVILCVRNA NPNGDPLNGN RPRTTYEGLG EISDVAIKRK IRNRVMELAK
EIERIKEEER TEAQKQAYER LKGVEHPIFV QSDDNRNDEY TSLRERAEAY LKDFMNDRSA
YQKKACETWF DVRAFGQVFP FKGKGKGKKG DKSNEGEESD GVSIGIRGPV SIHPAFSVVP
VLDRVSSIQI TKSVSNEPGE KRGSDTMGMK HRVDHGVYVF YGSINPQLAS KTGFSDDDAA
VIKEALRTLF RNDASSARPE GSIEVYRVYW WKHNSPNGQY SSAKVHRSLR VRVRDGIEDP
KSIDDYVIEL QDLDGLKPEV IEGE
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