Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4331 |
Symbol | |
ID | 5211315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5443523 |
End bp | 5444191 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640597915 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001278619 |
Protein GI | 148658414 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000854832 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.165932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCG AATACACACC AGACGAACTA CTGCCCCTTT CCGGCATCCA GCACTTTCTC TTCTGCCGCC GCCAGTGGGC ATTGATTCAC ATCGAGATGC AGTGGCAGGA CAATGTGCTG ACGGTAGAAG GCAAACAGTT GCACGAACGG GTCGATGATC CCTTCTTTGT GGAAACGCGC CGCGATGTGG TCATTTCACG CTCAGTTCCG GTTGCATCGT ACACGCTCGG TCTCTCAGGC GTCTGCGATG TGGTGGAGTT CACCCGCAGC CCGGAGGGTG TCCGGTTGCC GGGACGCGAA GGGTTCTACC AGCCTGCACC CATCGAGTAC AAGCGTGGTC ACCCCAAGCG CGATCCGGTA GATGAAGCTC AATTGTGTGC ACAGGCGATG TGTCTGGAAG AAATGCTGGC AGTTCCCATT CCGCGCGGCT TCCTGTACTA CGGCAAAACC CGTCGCCGCG AACCGGTGGA GTTGACAGAA GATCTGCGTC GTCTGGTGCG CGACGCAGCC GCCGAGATGC ACGCATACAT GGCGCGCGGC TATACACCGC GTGTGAAGAC CAGCAAGGCG TGTCGATCCT GCTCACTGGC AGATCTCTGT CTTCCGAACC TCCAGGAAAA AACTTCTTCC GTTCAGACCT ACATTCGACG GCAGATCGAG CAGGCGTGA
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Protein sequence | MTREYTPDEL LPLSGIQHFL FCRRQWALIH IEMQWQDNVL TVEGKQLHER VDDPFFVETR RDVVISRSVP VASYTLGLSG VCDVVEFTRS PEGVRLPGRE GFYQPAPIEY KRGHPKRDPV DEAQLCAQAM CLEEMLAVPI PRGFLYYGKT RRREPVELTE DLRRLVRDAA AEMHAYMARG YTPRVKTSKA CRSCSLADLC LPNLQEKTSS VQTYIRRQIE QA
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