| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4228 |
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| Symbol | |
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| ID | 5211213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5297006 |
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| End bp | 5298466 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597817 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001278521 |
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| Protein GI | 148658316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0386207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC TCGCAACCAC TGTGCTCCGC AACTCGATCG TCGGTATGGC GGCGCATATC
AGTATGAAAC TTCTCTCGTT CGCGTTCTCG GTGCTGATCA TCCGCAACCT GGGCGCGACC
GATTTCGGAC AGTATGCCGC CGTGCTCGGT TTTGGCAGCG TCTTCCTGTT CATTGCCGAT
CTTGGGTTAA GCCCGTACAC GGTGCGCGAA GTGGCGCGCC TGCGCGACCA GCCCGACGGC
AAAGAGCGCA TTCAGGCGCT GTATGCCGAT GTGCTGACCA TGCGCCTGAT CCTGTCGGTC
ATTGCGGGGA TTCTGGTAGT CAGCGCTGCA ATCCTGACTG GACGACCGCT TCTGATGATT
GGAGCGATTG CGATCAACTC GTTCACCGTG CTGATCTACG CCGTCCACGG CAGCAGCGAA
GCAGTGCTCT CCGGGTATGA GCGCCTCGAT CTGGTGTCAG GCATGCAGGT TGTCAATCAA
CTCGCGTTTG TGCTGATCGG CGGGCTGGCG CTCTGGCTGG GGTTCGGCTA CTACGGTCTG
ATCATCGCAA CGATGATCGG GGTGACCCTT ATGACAGCGC TGGTCGTTCG CGCAGTCTGG
CGACTGGGGG TGCGTCCCGG TCGCGTGACC TGGCGACGCT GGCTGCCGCT GTTACGCGCT
GCATTTCCGT TCGGCGTCAT CGGTCTGACC CTGGGGATTT CATACCGCTT CGATACGGTG
CTGCTCAACA TTTACGAGGG CGATACGACG ACCGGCTATT ACAATGCTGC ATACAATCTG
ATCTTCTCGC TGGTGACGCT GTCGAATGTT CTCAACACCG CGCTCTACCC CTCGCTCTCG
CGGCAGTCGG TAACGGCGCC GGAGACGTTG CCGCTGGTAT ACGAGCGTGT GTTGCGCTAC
CTGATGGTGG TGGCGCTGCC GATTGCAGTC GGTGGTTTCA TCGTCGCCGG TCCGCTGGTA
GAACTCTTGT TCGGTGCGGC TTACGCACCG TCCGCTCCGC TCTTCGCCAT CCTGATCTGG
GTGCTGCCGT TGATGTTCCT CTCCGAATTC CTCGGTTATG TGGTCGTCAT TGCCGGGCGC
GAGGCGCTGG TCGCGCGCTC GATCATTGTC AGCAGCAGCC TCAATGTCGT CGCCAACCTT
CTGTTTATTC CGATGTTCGG TGTTGTGGCT GCGGCGACCG TCACAGTCGC AACCGAGGCA
GTGCTGGTGC TCCAGTATAT CTGGTTGACG CGCGACCTGC TGGGGCGAAT GCAATGGAGC
GCACTTCTGC GCTCAGCGCT GGCGGTCGTC GCAATGGCGG CGCTGGTCTA TCTGACGCGC
AACCTGCCGG TGCTGGCGAC AATTGCTGTC GGTGGGGCGC TCTACGGCGG GTTGCTGCTG
GCAATGCGGG TTGTCGGTCC GGATGAAGCG GCATTTGTGC GGAGCATGCT GGCGGCGCGG
CGGGCGGTCA AGCAAATATG A
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| Protein sequence | MNQLATTVLR NSIVGMAAHI SMKLLSFAFS VLIIRNLGAT DFGQYAAVLG FGSVFLFIAD
LGLSPYTVRE VARLRDQPDG KERIQALYAD VLTMRLILSV IAGILVVSAA ILTGRPLLMI
GAIAINSFTV LIYAVHGSSE AVLSGYERLD LVSGMQVVNQ LAFVLIGGLA LWLGFGYYGL
IIATMIGVTL MTALVVRAVW RLGVRPGRVT WRRWLPLLRA AFPFGVIGLT LGISYRFDTV
LLNIYEGDTT TGYYNAAYNL IFSLVTLSNV LNTALYPSLS RQSVTAPETL PLVYERVLRY
LMVVALPIAV GGFIVAGPLV ELLFGAAYAP SAPLFAILIW VLPLMFLSEF LGYVVVIAGR
EALVARSIIV SSSLNVVANL LFIPMFGVVA AATVTVATEA VLVLQYIWLT RDLLGRMQWS
ALLRSALAVV AMAALVYLTR NLPVLATIAV GGALYGGLLL AMRVVGPDEA AFVRSMLAAR
RAVKQI
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