| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4186 |
|---|
| Symbol | |
|---|
| ID | 5211170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5242040 |
|---|
| End bp | 5244175 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640597775 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_001278480 |
|---|
| Protein GI | 148658275 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase
[COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.680572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000013918 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCTG CCTTGCAGAA ATTCCCCGCA ACAATCGCGC GTCCTGTAGA GGTCGTGCGC
GGCTATTCTC TCGAGACTCT GCGCGCCGAC CTGGTAGCAG GCATAACCGT CGGGCTTGTG
CTGCTGCCAC AGGCGCTGGC ATTTTCGCTC CTGGCGGGTC TGCCGCCGGA AATGGGGTTG
TACTCCGCTA TCGTCGCTTC AATCGTTGGC GCGCTCTGGG GATCATCGAG CCATCTGCAC
ACCGGTCCGA CGAATACGGC ATCCCTGCTC ACCCTCTCGG TCATCCTGCC GCTCGCCACG
CCTGGCACGC CTGAGTTTAT TGCCGCAGCT GGCATGCTTG CGATCCTCGC CGGTGCGCTG
CGCCTTGCCT TCGGTCTGGC GCGCCTGGGA CTGCTGGTCA ACTTCGTTTC CGACTCGGTC
GCCGTTGGGT TCACAGCAGG CGCCGGCATT CTCATTATGT CCAATCAAAT TGCGCCGATC
CTGCGAATCG ATCTTCCGAT GGGTGCAAGT CTGGTCGATA CGTTTGTTCT GAGTGCAGCC
TCTATCGAAC GCACCCACCT GCCGAGTCTC ATCCTGGGTG TCGCAACCAT CGTTCTCATT
GCGGCGCTTC AACGGGTTCA GCGTCGCCTG CCGACCTTGC TCATCGCGCT GATCATCGTG
TCCCTGGTCG CCTGGATGCT GCGCCTGGAG GAAGCCGGTG TGCGCACCCT GGGGGCGCTG
CCGCAGTCGC TCCCTCCGTT CGCCAATCTG CCGCTCTTCG ATCTGAATCT GATTGGCGCA
CTGGCAAATG GTGCGCTGGC GGTCGCCATC ATCGGGTTGG TGGAAGCATC GGCAATTGCT
CGCGCGATAG CGACCCACTC GCAACAACGC CTCGACAGTA ATCAGGAGTT TATCGGACAG
GGGCTGGCAA ACATCTGTGC CGGTCTGTTT TCGGGATATC CGTGCTCCGG GTCGTTCAAC
CGGTCGGCGC TCAGTCTTCA GGCAGGTGCG CGCACCGGTA TGGGCAATGC ATTTTCCGGA
ATCTTCGTCC TCCTGGCAAT ATTCCCGCTC GCGCCGCTCG TAGCGCACTT GCCGCGTCCG
GTGCTGGCAG GCGCGCTGGC AATCACCGCC TGGAGCATGG TCGATTACCG GGCAATTGCT
CGCATCTGGC GCGCTGATCG CACCGATGGG GCGATTTCGC TCATCACCCT GGCGGCGACC
CTTCTCGTTC CACTCCAGTT TGCCATCATC AGCGGCGTCC TCATGTCGCT CGGCGCATAT
CTGTGGCGCA CCAGCGCGCC GCGGGTGCAG AGCGTGCTGC CAGATGCCGA CTTTCGCCAC
TGGGAGTATC AACCGCATCT GCCGATGTGC CCGCAACTGG CGGTTGTCGA TGTGCTTGGC
GATCTCTACT TCGGCGCCGT CAACCACGTC GAAGAGCAGA TGAACGCATT GATGACCCAA
AATCCGTCGC AGCGGTTTCT CCTGTTGCGG ATGCACAGCG TCCAGCGTTG CGACATCAGC
GGCATCAAAA TGCTCCAGAT GATTGTGCGC CAGTACCGTG ACCGCGGCGG CGGCGTCTAT
TTTGTGCGTG TGCGCCCGCC GGTGCGTCAG ATCATGGACG TCTCCGGTTT TACGCAGTAC
GTGGGGGAAG ACCATTTTCT GGACGAAGAC CATGCCATCG ACTATCTCTT CCATCGCGTG
CTCGATCCGG CAGTCTGCAT TTATGAGTGT GAAGTGAAGG CGTTCCGCGA ATGTCAGAAC
CTGCCGAAGC GTCCGTTGCC CGCCGAAGCC ATTCCGCTCC TGCCGACAAA CGTCGCCCCG
GCGCCGGGTT CAACCATTGA GCCGCGCGAA TTGTGGCGTC AGATCCGCAG TGCATCCCCG
CCGCGCGTCA TCGATGTGCG CGAGCCGCGT GAGTACCGTC AGGGGCACAT TCCAGGCGCG
GAGTTGCTGC CGCTCTACGA ACTGCTGACC AATCCCGATC AGGTAAGCCG TGACCGACCT
GTCGTCCTGG TTTGCCGGAG TGGGCACCGA AGCGAACGCG CCGCAGCCGC GCTGCTGAGT
CGCGGGTTTG GTCGAGTGAC CATTCTGAGC GGCGGTATGC TGGCGTGGGA AGCCAGTGAT
CTGCTGATGG CGGTGGAGTT TGGGGGGGAA CGTTGA
|
|---|
| Protein sequence | MLAALQKFPA TIARPVEVVR GYSLETLRAD LVAGITVGLV LLPQALAFSL LAGLPPEMGL
YSAIVASIVG ALWGSSSHLH TGPTNTASLL TLSVILPLAT PGTPEFIAAA GMLAILAGAL
RLAFGLARLG LLVNFVSDSV AVGFTAGAGI LIMSNQIAPI LRIDLPMGAS LVDTFVLSAA
SIERTHLPSL ILGVATIVLI AALQRVQRRL PTLLIALIIV SLVAWMLRLE EAGVRTLGAL
PQSLPPFANL PLFDLNLIGA LANGALAVAI IGLVEASAIA RAIATHSQQR LDSNQEFIGQ
GLANICAGLF SGYPCSGSFN RSALSLQAGA RTGMGNAFSG IFVLLAIFPL APLVAHLPRP
VLAGALAITA WSMVDYRAIA RIWRADRTDG AISLITLAAT LLVPLQFAII SGVLMSLGAY
LWRTSAPRVQ SVLPDADFRH WEYQPHLPMC PQLAVVDVLG DLYFGAVNHV EEQMNALMTQ
NPSQRFLLLR MHSVQRCDIS GIKMLQMIVR QYRDRGGGVY FVRVRPPVRQ IMDVSGFTQY
VGEDHFLDED HAIDYLFHRV LDPAVCIYEC EVKAFRECQN LPKRPLPAEA IPLLPTNVAP
APGSTIEPRE LWRQIRSASP PRVIDVREPR EYRQGHIPGA ELLPLYELLT NPDQVSRDRP
VVLVCRSGHR SERAAAALLS RGFGRVTILS GGMLAWEASD LLMAVEFGGE R
|
|---|
| |