Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4179 |
Symbol | |
ID | 5211163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5233405 |
End bp | 5234952 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597768 |
Product | hypothetical protein |
Protein accession | YP_001278473 |
Protein GI | 148658268 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0341375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCGG AAATGCGCGC CTTTGTCGAC TCATTGCGCA AGAACATCAC TGCCGAGGAT GTCGTCAATC TCGAAGCGTG TCTGAACTGC AAGATGTGTG GTGAAGCATG CGCCTGGTAT CTGGTCACCG GCGACGAAAA ACTGCATCCA ACCCACAAAA CCGGTTTTAT ACGCCAGATT TACCAGCGCT ACATGACGGT CGAGGGACAG GTTGGAGGCG CGCTCGGACT GGTTCCCACA CCCACGGTCG CCGATCTTCA GGAGAACATG CGCTATTTCT GGGCATGCAC CGCCTGCGGA CGCTGCACCC TCGCCTGTCC GACGGGCATC AGCATCCGCC GGATTGTGCG CCTGGCAAGG GCAGCCTACT CCGACTCCGG ATTGAGCCAT GCCAACCCTA CCATCCGATC GATTGTCGAA AACACCGAGC GCTACCGCCA CAGTTTCGGC TTGACCGTCC CCCAGGTGAT CGGGCGAGTC GGGCTTTTCC TGCGCAGCGA AGGAATCGAA GTACCGGTCG ATGTGCACGG CGCCGAGATG CTCTTCGTCT GCCCGGCAGC CGGTAACACC AAAATCCCCG ATTACGGCAT CAAATTGATC AAGATCCTCA ATGCTGCCGG GGTCAGTTAC ACGGTCTCAC CGTATGTGAT CGACACCGGC ACCGAGATCG ATCATATTGC CGTCCACCAC AATCTTTCGC GGCAAATGCT GGAGGAGTGG GAACAGGAGG CGGATCGGTT GGGTGTCGAG AAGATCCTGC TGGTGGAATG TGGCTGCGAT GCGCGCACGC TCTACGCCGA GGCGTCGGAG ACGCTGGGAC GTCCATTCCG CTACCCGATC ATCAGTGTCG ATACGTTGAT GCTCGATCTG ATCAAACAGG GGCGCCTGCC GGTAGAGAAG ATCGACACCA AGATCACCCT GCACGACCCA TGTTACGCCA CCCGTCTCTC CGGTCTCGGC GACACCTTCC GCGAACTGTT GAACCTGGTC TCCAACAATT TCATCGAAAT GACCCCCAAC CGCGAGCACA ACTACTGCTG CAACGGCGGC GCAGGCGGCA TGCGTCTGCC GGAAAACACC GAACTGCGCC GCAAGATCTC GGTGCTGAAA GCCAATCAGA TCCGTGCAAC CGGCGCGGAG TATGTCACCT CGCCGTGCGT CGTCTGCACC CTCTCGCTGG AAGACACCTG CCACACCTAT GGACTGGCGC AACCCGGCGA ACGCATGGCG CTGGTGCTGT TCGAGGTGGT CTACGATGCG ATGGAACCGG CACTGGCGAA GCGCGGCGAA CTGGATCGTA TGTATGTCCC GGCAGAACTG CGGAACCGTG ACCACGACTT CTTCCTGGCG CACAGCATCG AAGGGCGGAT GGCGGCGCTG ATGCAATCAC CGGAGTTCCC GGCGCTGCTC GACTGGCTGG AGCGTGATGA GATCGTCAAA CGCTTCAGCA CGACCCATCC GCAGGTGTAT GAGCATTTGC GCTCACTGCG TGAAATGACA ACGCCGTCGA TGCCGGCGAT GCGTGCGCGT GCAGTGGCAG GTCAGTAG
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Protein sequence | MEAEMRAFVD SLRKNITAED VVNLEACLNC KMCGEACAWY LVTGDEKLHP THKTGFIRQI YQRYMTVEGQ VGGALGLVPT PTVADLQENM RYFWACTACG RCTLACPTGI SIRRIVRLAR AAYSDSGLSH ANPTIRSIVE NTERYRHSFG LTVPQVIGRV GLFLRSEGIE VPVDVHGAEM LFVCPAAGNT KIPDYGIKLI KILNAAGVSY TVSPYVIDTG TEIDHIAVHH NLSRQMLEEW EQEADRLGVE KILLVECGCD ARTLYAEASE TLGRPFRYPI ISVDTLMLDL IKQGRLPVEK IDTKITLHDP CYATRLSGLG DTFRELLNLV SNNFIEMTPN REHNYCCNGG AGGMRLPENT ELRRKISVLK ANQIRATGAE YVTSPCVVCT LSLEDTCHTY GLAQPGERMA LVLFEVVYDA MEPALAKRGE LDRMYVPAEL RNRDHDFFLA HSIEGRMAAL MQSPEFPALL DWLERDEIVK RFSTTHPQVY EHLRSLREMT TPSMPAMRAR AVAGQ
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