Gene RoseRS_4171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4171 
Symbol 
ID5211155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5223106 
End bp5223756 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID640597760 
Productflavodoxin-like protein 
Protein accessionYP_001278465 
Protein GI148658260 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CAAACTCTCC GTCCCGCCGC CGTTTTCTCA AGGCTGCCGG ACTGACGATT 
GCCGGCGCGA CATTGACCTG CGCCGGTCTC GGTGTTGCCG CGACTCGTCC GCCTGCCGTC
GAGTTGCCCG ACAGAACGCT GGAAGGAGAA CAAGCCGTGA ACAACCGTAT CCTCGTGACC
TACGCCACCC GCGCCGGTTC AACCGCCGAG ATCGCGACCG CCATCGCCGA GACCCTGGCA
GCCCGTGGGT ATTCTATCGA TCTCAAACCG GTGAACGAGA AGCCCGACCT GAGCGGTTAT
GCCGCCGTGG TGCTCGGTAG TGCCATCCGT ATGGGACGCT GGCTGCCCGA AGCGGTAGAT
TTTGTCAAAG CGCATCGGGA CTCCCTCAAC GCCGTGCCGG TTGCGCTGTT TACCGTCCAT
ATGCTCAACA CCGGCGATGA TGAATCCAGT CGGACGGGAC GCCTGGCATA CCTGAACGAC
ATTCGACCGC TGCTGCCCGG CGCGGGAGAG GTCTACTTCA CAGGTGCGAT GGATTTCAAG
CGCCTGTCGT TCCTCGATCG CCTGATTGCG AAGATGGTCG GAGCGATCGA AGAAGACCGG
CGCGATTGGG GTGCGATCAA ACAGTGGGCC CGCACCGTCG AGGTGGGATG A
 
Protein sequence
MTTTNSPSRR RFLKAAGLTI AGATLTCAGL GVAATRPPAV ELPDRTLEGE QAVNNRILVT 
YATRAGSTAE IATAIAETLA ARGYSIDLKP VNEKPDLSGY AAVVLGSAIR MGRWLPEAVD
FVKAHRDSLN AVPVALFTVH MLNTGDDESS RTGRLAYLND IRPLLPGAGE VYFTGAMDFK
RLSFLDRLIA KMVGAIEEDR RDWGAIKQWA RTVEVG