| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4158 |
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| Symbol | |
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| ID | 5211142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5206371 |
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| End bp | 5208041 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597747 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001278452 |
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| Protein GI | 148658247 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.6446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA CATCTGCATC CAGGCACTCA TCACGCAGCC TCTCGCTGTT GCTCGCTCTT
GCGCTGATCA GCCTGAGTGT GCTGTCGCTC TCGATCAGCA ATGCGTTGCA GGTCGCCTCG
AACTGGCGGG TGCATCAGCG TGCGCTTGCT GCTCAGCAGC AGTCGCTTGC TCACGGGGTA
GCCGTCGAGA CGCAAACGTT CCTCGATGCA CGCTGGAATA TGTTGAACAC AGCTATCAGG
ATGTCCAATC TGGCGACTGC GCCGGTGGCG CATCGTATCG AGGCGCTGCA ACGCCTGCTC
GCCCTCGATC CGTCGTTTGA ACAGTTGACG ATCCTGGATG ATAGACGCTT TGTCGTCGCG
GCGGTCAGTC AGAATCGCCA GAGGACGCCC AACTTCCTCG ATACAGCGCT GGTCGAGGAG
ATCATGCACC AGACAACGCT GCGGAATCGC TATGTCAGTT CACTGCGGAT CGATGGTGCG
ACAGGTGAAC CGGGTATCAT CCTGGCGTTG CCACTGGTCG ATTCATTTGA AAACGATCAG
GGCGCGCTGA TAGCGACGGT CAACGCCAGA TTTCTGTGGG ATGCCCTTAA GCGGCAGTTG
CCCTTCCGTG AAGGGATCGC ATATATTGTC AACCGGGATG GCGATCTGCT GGCCTGCACC
GACACTGCGC GCGTGCTACG CGGCGACACC GCCGTTGATA TCCCTGTGGT GCAGGCAGCA
TTTGCCCATG ACCGCTCCGG CTCGTTCCAG ACCCTGCACT ATACCGGTCT CACCGGCATC
GAGGTTGTTG GCAGTTACGA AGCGCTCCGA GAGCCAGCGT GGGCAGTAGT GGTCGAAGTG
CCACGCACCG TCGCCTATCG TGATATTGTG AACGATATTG GCGTTTCAGC GCTTATTCTC
CTGAGCGCGG CAGTCGTGTC CGGCGGTATT GGCGTCTACC TGGCGCGCTG GTTGTCGGCG
CCGTTGCACC GTCTGACCCG CCTGGCGGAG CGTATCGCAG CGGGTGAGCG CGATCTGCGG
GTTGCTGTGC GCGGTCCGCG TGAGGTGGAG ATACTTGCGC GCGCGTTCGA TACCATGACC
ACGCAACTCG AACAGAACCT GGAGACGCTG GAACATCGGG TTGCGGAGCG AACTGCCGAT
CTGCAAGCAG CGCTTGCCAG GGTTGAGGCG CAGGCGCAGG AGCAGGCGCG GTTGCTCGAA
GAAATCGCGC AGCAGCGCCA GGCGATTCGA GAATTGAGCG TTCCGGTGCT GCCGGTGACC
GATCAGGCGC TGGTGATGCC GCTGGTCGGC GCGATTGATA CCGAGCGGCT GGCGGATATT
CAGGATCGGG CGCTGCACGC ATTGCAGCGG TCGCACGCAC GCTATCTGCT CGTCGATATC
ACCGGCGTGC CGGTGGTCGA TAGTCAGGTT GCGCAAGGTT TGCTTGCGAT CAACGCCATG
TGTCGGTTGC TGGGCGCCGA AATGGTGTTG ATCGGCATTC GCCCCGAAGT GGCGCAGACA
ATTGTGGGCC TGGGGATGAA CCTGTCGTCG CTGCGAACCG CCGCCGACCT GCAGACGATA
CTGGGTGAGA TCACCCGCCG GGATCAGGGT CGTGCAACGC GCAATGGCGC CGCGAACGGC
GGCATCGCAC AGAACCATGC GTTCTTCGAT CTGTTCAGCA GCCGCGATTG A
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| Protein sequence | MNITSASRHS SRSLSLLLAL ALISLSVLSL SISNALQVAS NWRVHQRALA AQQQSLAHGV
AVETQTFLDA RWNMLNTAIR MSNLATAPVA HRIEALQRLL ALDPSFEQLT ILDDRRFVVA
AVSQNRQRTP NFLDTALVEE IMHQTTLRNR YVSSLRIDGA TGEPGIILAL PLVDSFENDQ
GALIATVNAR FLWDALKRQL PFREGIAYIV NRDGDLLACT DTARVLRGDT AVDIPVVQAA
FAHDRSGSFQ TLHYTGLTGI EVVGSYEALR EPAWAVVVEV PRTVAYRDIV NDIGVSALIL
LSAAVVSGGI GVYLARWLSA PLHRLTRLAE RIAAGERDLR VAVRGPREVE ILARAFDTMT
TQLEQNLETL EHRVAERTAD LQAALARVEA QAQEQARLLE EIAQQRQAIR ELSVPVLPVT
DQALVMPLVG AIDTERLADI QDRALHALQR SHARYLLVDI TGVPVVDSQV AQGLLAINAM
CRLLGAEMVL IGIRPEVAQT IVGLGMNLSS LRTAADLQTI LGEITRRDQG RATRNGAANG
GIAQNHAFFD LFSSRD
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