Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3991 |
Symbol | |
ID | 5210974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4992617 |
End bp | 4993960 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597582 |
Product | hypothetical protein |
Protein accession | YP_001278288 |
Protein GI | 148658083 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0970937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTACGC GCTTCACCAT CATTGCAATC CTGATCTCAT CACTGCTGGC GGCATGTGTC GCAACCCCGG CGTTTGTGAC GGCGCCGCCG CCAGATGGTG CAATGCCGAC TGCGGCTGTG CGTGCGCCGA CGCTCGCGTC GTTGCAGGTG ACGCCTGCTG GCATGCCAGC GTTTTCGCAA GCAAATGTGA CTCCATCACC AACGCTGCAA CCGGTTCCCA CGACGCTCCC AACACCCATT CCGCCAACCA TGCAACCGCT TGGTCCGGGC GGTCTGCCGC ATCCGTTGCG CGTCCGTCGG TTGCAGTTCG GCGTTCATGC CCATCTATTC TGGACTGATC GCGCTACGCC GTTGCGCCTG GCGCGGGATG CAGGGTTTGG CTGGATTCGC CAGCAGATCC ACTGGAAGGA CCAGGAGGGT CCTCCTGGCT TCTATGCCTG GGGCGCGGAA CTCGACGCGC TGATTGCCGA TGTCAATGCG TACGGGCTGA AACTGATGAT CTCGGTCGTC CGGTCGCCGC ACTTCTACGG GCGCGGCGGC AGCGATGGGT TGCCGGAGAA TCCCGAAACG CTGGGGAACT TCGTGGCGGC GCTGGCGCAG CGGTACAAGG GGCGCATTCA CGCCATTCAG ATCTGGAACG AGCAGAACCT GGCGTATGAG AATGGCGGAT ATGTCTCAAC CGAAGACGCA CAGCGCTATG TCGAAATCCT CAAAGTGGCG TACACCCGTA TCAAAGCGAT CGATCCGACG ATCATCGTTG TGAGCGGCGC GCCAGCATCA ACAGCGGTTG ACAGTCCTGG GATTGCCATT TCCGACATTC GCTACTACAG TGCAATGTTC TCCTATGAGA ACGGCATCAT TCGCAACTAT GTCGATGCGC TTGGCGTGCA TCCTGGCGGC TCCGCCAACC CGCCGGAGAC ATTCTGGCCC GACGCGCCGA GTCCGGCGCA GGGGTGGACC GACCATCCAA CGTTCTACTT CCGCAATGTG GAACGTATTC GTCGGTTGAT GGAGGAGTAT GGTCTGGCGG ACCTGCCGGT GTGGATTACG GAGTTCGGTT GGGCGACGCG CAACAATACG CCCGGATTCG AGTTCGGCAA TCAGGTATCA TATGAGCAGC AGGCGCAGTA TATCGTCGGA GCGATGGAAT GGACTGCCGA ACGGTACCCG TGGGTCGATG CCATGTTTCT GTGGAACCTG AACTTCGCTC CCCTGCGTGC GCGCAACGGC GAACCCTGGC ACGAACAGGC GTCGTTCAGC ATCATCAACG CCGATTACTC GCCGCGCCCG GCGTATCGGG CGGTTCAGCA GTACATCATG CAGTATCATG CCCGTCGTGA ATGA
|
Protein sequence | MGTRFTIIAI LISSLLAACV ATPAFVTAPP PDGAMPTAAV RAPTLASLQV TPAGMPAFSQ ANVTPSPTLQ PVPTTLPTPI PPTMQPLGPG GLPHPLRVRR LQFGVHAHLF WTDRATPLRL ARDAGFGWIR QQIHWKDQEG PPGFYAWGAE LDALIADVNA YGLKLMISVV RSPHFYGRGG SDGLPENPET LGNFVAALAQ RYKGRIHAIQ IWNEQNLAYE NGGYVSTEDA QRYVEILKVA YTRIKAIDPT IIVVSGAPAS TAVDSPGIAI SDIRYYSAMF SYENGIIRNY VDALGVHPGG SANPPETFWP DAPSPAQGWT DHPTFYFRNV ERIRRLMEEY GLADLPVWIT EFGWATRNNT PGFEFGNQVS YEQQAQYIVG AMEWTAERYP WVDAMFLWNL NFAPLRARNG EPWHEQASFS IINADYSPRP AYRAVQQYIM QYHARRE
|
| |