Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3958 |
Symbol | |
ID | 5210942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4956859 |
End bp | 4957977 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640597552 |
Product | NAD(FAD)-dependent dehydrogenase-like protein |
Protein accession | YP_001278258 |
Protein GI | 148658053 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.203323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATTGA CCCATCCCGG ATTGCCCTTA TCGAGCCGAG CGCGCACCAT TTCTACCAGC CGCTCTGGAC ACTCGTTCGG TGGCGGGGTT TTCCCCAAGG AAGAGTCGAT GCGTCAGGAA GCGGACTACA TTCCGGCTGG CGTGACGTGG ATCCAGGAGT ACGTCACTGC GTTTGATCCG GATCAGAACC AGGTCGTTCT CAAGAATGGC GACACCATCA CCTACGATTA CCTGGTGGCG GCGCTCGGCA TCCAGATCGA TTGGGACAGA GTGAAGGGCT TGCGCGAGGC GCTGGCGGAG CGCAACGGCG TGTGCAGCAA CTACTCCTAC GAAACGGTGG ATCGCACCTG GGACAACATT CGCTCGTTCA GGGGAGGCGT TGCGGTCTTC ACCCAACCAT CGACGCCAAT CAAGTGCGGC GGCGCGCCCC AGAAGATCGC ATACCTCGCC GATGATCACT TCCGCCGCGC TGGCGTGCGC AACAAAAGCA CTATCAAGTT CTACTCCGGA ACCGGCGGCA TCTTCTCGGT CAAAAAATAT GCCGACGCCC TCTCTGCCGT ATGCCGCCGC AAAGGGATCG AAACGCACTT CCAGCACGAG CTGGTCGAGA TCGATCATCG CCGGAAGGAA GCGGTCTTCC AGAATCTGGC GAGCGGCGAT CACACCGTAG TGCGCTATGA TATGATCCAC GTCACGCCGC CGATGAGCAG CCCGGATGTT ATCAAGCAGA GCAAACTCGC CGCTTCGACC GGTTGGGTCG AGGTTGATCA ATTCTCGTTG CAGCACGTGC GTTATCCCAA TGTTTTCGCG CTTGGCGATT GCAGCAACCT GCCAACATCG AAGACTGGCG CTGCTATTCG CAAACAGGCG CCGGTGCTGG TGGAAAATCT GCTCGCAGCA ATGGATGGGC GACCACTCGA GGCTGTCTAC GATGGATACA CCTCCTGCCC GCTGGTGACC GGCTATGGCA GCCTGATCCT TGCCGAGTTC GACTACCAGT TGACGCCGAA GGAGTCGTTC CCGTTCGATC AGTCGAAGGA ACGCTATAGC ATGTATGCGC TGAAAGCCTA TGGTTTACCG GCTATGTATT GGAACGGCAT GCTGCGCGGG CGCATGTGA
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Protein sequence | MRLTHPGLPL SSRARTISTS RSGHSFGGGV FPKEESMRQE ADYIPAGVTW IQEYVTAFDP DQNQVVLKNG DTITYDYLVA ALGIQIDWDR VKGLREALAE RNGVCSNYSY ETVDRTWDNI RSFRGGVAVF TQPSTPIKCG GAPQKIAYLA DDHFRRAGVR NKSTIKFYSG TGGIFSVKKY ADALSAVCRR KGIETHFQHE LVEIDHRRKE AVFQNLASGD HTVVRYDMIH VTPPMSSPDV IKQSKLAAST GWVEVDQFSL QHVRYPNVFA LGDCSNLPTS KTGAAIRKQA PVLVENLLAA MDGRPLEAVY DGYTSCPLVT GYGSLILAEF DYQLTPKESF PFDQSKERYS MYALKAYGLP AMYWNGMLRG RM
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