| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3859 |
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| Symbol | |
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| ID | 5210841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4824504 |
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| End bp | 4826018 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597454 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001278162 |
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| Protein GI | 148657957 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.447607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00632845 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGAAA TCTTAACAAC CATCGCGGCG TTGCAACGGG CGGTGGCGCA TGCGCCGCAC
CGTCCATTTC TGCTGTTTGA AGGGCGCGCT TACCCCTATG CTACCGTTGC CGCAGCCGCT
TCCCGCTGGG CGACCCGCCT GCGCGCCGCT GGGGTTGAAC GCGGTGACCG CGTCGCACTC
TACCTGGAGA ACAGCCCGGC GTTCGTGGCT GCATACCTGG GCGCTCATAT GATCGGCGCA
ATTGTGGTAT TGATCAACAC GCAGTATCGT CACACCGAAC TGCGCCATAT CCTGAGCGAC
TCCCAGGCGC GCGTGATCAT TGTCGGCGAT CAGGCCCACG CCGATCTGGT CTGCCAGGCG
CAGGAAAACG CCCAAACCAT TCGCGCCGAC GCGGTTGTGC TGGAGGAAAC GGGCGATATG
CCGGATTGGG CGTCTGCGCC CGCACCGCAC GATATTGCGC TCCTTGGGTA TACATCGGGC
ACAACCGGAC GATCCAAGGG AGCGATGCTC ACCCACGCCA ACCTGATGGC GAATAGTGCG
GCGGTTACAC GCGCCTGGCA TTGGACCGAA CAGGATCGGC TGCTGCTGAC ACTGCCACTG
TTCCACATTC ATGGTCTTGG GGTGGGGTTG AACGGCGCCC TCTTCACTGC CAGCACGGTC
GATCTGCGGC GCGGTTTCGA TGCGACCGAC GTGATCGACA CCCTGACGCG CGGCGAAACG
ACCATGTTCT TTGGCGTACC GACCATGTAT ACCCGCCTGA TCGCCGAGGC GCGGCGGCGA
CTGGCAGAAG GAGCGCCGTT TCGCGTCGAT ACGGTTCGCC TGTTCGTCTC CGGTTCGGCG
CCGCTCACCC CGCAAACCTT CGCCGAATTC GAGGAACTGT TCGGTCAACG CATCCTGGAA
CGCTACGGGA TGACCGAAAC CATTATGAAT CTGACCAACC CCTACGATGG CGAACGTCGC
CCCGGAACAG TCGGCATGCC GTTTCCGGGT CAGGAAGCGC GGATTGTCGA TGTGCGCACC
CGTCAACCGA TCCCCGATGG CGTCATTGGC GAAATTCAGG TGCGCGGTCC GAATGTGTTC
GCCGGATACT GGCGCAACCC GCAGGCGACC GCCGAAGCGT TCGATGCCGA TGGGTGGTTC
AACACCGGCG ACCTGGGCTG GCGAGGCGCC GATGGCTATT TTGTCATCAC CGGGCGCGCC
CGTGAACTGA TCATCAGTGG CGGGTACAAT ATCTATCCGC GCGAGGTCGA GGAAGTGCTG
CTCGACCACC CCGCCGTCGC CGAAGTCGCC GTTGTCGGGT TGCCCGACCC GGAGTTTGGT
GAACAGGTGG TGGCGGTGGT TGTGCCGACA GCGCAACCGC GCGACGGGCT GGAACAGGAG
TTGATCGACT GGTGCCGCGC GCGCCTGGCG AGTTACAAAA AACCGCGTCG GGTCATTTTT
GCTGCAACGC TGCCGCGCAA CGCACTTGGC AAGGTGCAAA AACATCTTCT GCAACAGCAA
CTTCAGGAAG CGTGA
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| Protein sequence | MTEILTTIAA LQRAVAHAPH RPFLLFEGRA YPYATVAAAA SRWATRLRAA GVERGDRVAL
YLENSPAFVA AYLGAHMIGA IVVLINTQYR HTELRHILSD SQARVIIVGD QAHADLVCQA
QENAQTIRAD AVVLEETGDM PDWASAPAPH DIALLGYTSG TTGRSKGAML THANLMANSA
AVTRAWHWTE QDRLLLTLPL FHIHGLGVGL NGALFTASTV DLRRGFDATD VIDTLTRGET
TMFFGVPTMY TRLIAEARRR LAEGAPFRVD TVRLFVSGSA PLTPQTFAEF EELFGQRILE
RYGMTETIMN LTNPYDGERR PGTVGMPFPG QEARIVDVRT RQPIPDGVIG EIQVRGPNVF
AGYWRNPQAT AEAFDADGWF NTGDLGWRGA DGYFVITGRA RELIISGGYN IYPREVEEVL
LDHPAVAEVA VVGLPDPEFG EQVVAVVVPT AQPRDGLEQE LIDWCRARLA SYKKPRRVIF
AATLPRNALG KVQKHLLQQQ LQEA
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