| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3810 |
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| Symbol | |
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| ID | 5210792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4765273 |
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| End bp | 4765839 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597406 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001278114 |
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| Protein GI | 148657909 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.605152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.790094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGCTT CTCCCGATCC CAATCCGGCA TCCTCCGACC GTGAACTGAT TGAACGCGCC
CGCAATGGCG ATCATGCGGC ATTCGCGCAG ATCTATGATC GCTATGCAAA GCCGCTGTAC
CGTTACATCT ACTTTCGGGT CGGCGACGCC GATCTTGCCG AAGATTTGCG GTCCGAAGTG
TTTCTGCGCG CCCTGGAAAG CCTTGATCGC TATGAAGATC GCGGATGGCC CTTCTCTGCC
TGGCTCTACC GGATTGCACG CGACCGGACA ATCGATATGC TGCGCCGTCG CCGCTTCCGA
CAGACCGTGC CGCTGGAGAG TTGGAGCGGC GCCTGTGAAG GTCCTGATCG CGAAGTCGCA
GCGCGCCTCG ATTGCGAAGA ATTGCGTCGC CATTTGTGCA ATCTTACCGA CGATCAACGG
CAGGTGATCT ATCTGCGGTT TATGGCTGAC CTCTCGGTGC AGGAAGTGGC GCTGCGGCTT
GGGCGTTCTG AAGGCGCAGT GAAAGCGCTG CAACATCGCG GATTGCAGTC GCTGGCGCGG
CGTCTTGCCG TCTGTGAGTG CGTATAA
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| Protein sequence | MHASPDPNPA SSDRELIERA RNGDHAAFAQ IYDRYAKPLY RYIYFRVGDA DLAEDLRSEV
FLRALESLDR YEDRGWPFSA WLYRIARDRT IDMLRRRRFR QTVPLESWSG ACEGPDREVA
ARLDCEELRR HLCNLTDDQR QVIYLRFMAD LSVQEVALRL GRSEGAVKAL QHRGLQSLAR
RLAVCECV
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