Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3791 |
Symbol | |
ID | 5210773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4742126 |
End bp | 4743238 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597387 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001278095 |
Protein GI | 148657890 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.100262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.807199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCACA AAGTGCGAGT TGGCGTGCTG TTCGGCGGTC AGTCTGGCGA ACACGAGGTC TCGCTGGTCT CGGCGCGCGC GATCATGGAC GGTCTCGATC CCGAGAAATA CGACATCATA CCGATTGGCA TCACCAAACA GGGGCGCTGG ATCATCGCCG CCGATGCGCA TGCGCGCCTG CTGGTACAGG CGGATCCGTC GAAGTTGCCG GGCGGTTCGA TCAGCGCAAC GACAACGGCG TCAGCCGGGG TCGGCGATCA GGAGACGACC GATCCGGGAA CGCTGATCGT TGCCGGTGAA TATTCACCGC TCAAAACACT CGATGTGATC TTCCCGGTTC TGCACGGTCC GATGGGTGAA GATGGAACGG TGCAGGGTTT GCTGGAATTG ATAGGCGTCC CGTATGTCGG CTGCGGCGTC CTGGCATCGG CAGTCGGCAT GGACAAGGCG ATGACGAAGG TTGCCTTCTC CGGCGCCGGG TTGCCGGTAT TGCCCTGGTT GCTCGTCCGG CGCCGCGAAT GGGAACACGA ACCGCAACGG GTGCTCGACT GGATTGAGAG TCGGTTGCAT TATCCTATGT TCGTCAAGCC AGCCAACCTG GGATCAAGCG TCGGGGTCAG CAAAGTGACC GATCGCGCGA CGCTGGAACA GGGCATCGCC GAAGCCGCTT CCTACGACCG GCGGATTATC GTCGAACAGG GCATCCCCGC GCGCGAGATC GAAGTCAGTG TCCTGGGCAA CGACGAACCG GAAGCCAGCG TTCCCGGAGA AGTCATTCCG TCCGGCGAGT GGTACGACTA CGCAGCAAAA TATCTGAGCG GATCGTCGCA GATTCTCATT CCAGCGCCGA TCACACTCGA ACTGGCAGCG CAGGTGCGCA CGCTTGCCGT TCAGGCATTC AAAGCAATCG ACGGCGCGGG TCTGGCGCGG GTGGATTTTC TGCTCAATCG TGAAACCGGC GATCTGTACC TGAACGAAAT CAACACCATG CCCGGTTTTA CACCGGTCAG CATGTATGCC ATGATGTGGG ATGCGAGTGG TCTCCCTTAC ACACATCTCC TGGATCGCCT GATCGATCTG GCGCTCGAAC GACACGCGAA AGGGCGGGCA TGA
|
Protein sequence | MTHKVRVGVL FGGQSGEHEV SLVSARAIMD GLDPEKYDII PIGITKQGRW IIAADAHARL LVQADPSKLP GGSISATTTA SAGVGDQETT DPGTLIVAGE YSPLKTLDVI FPVLHGPMGE DGTVQGLLEL IGVPYVGCGV LASAVGMDKA MTKVAFSGAG LPVLPWLLVR RREWEHEPQR VLDWIESRLH YPMFVKPANL GSSVGVSKVT DRATLEQGIA EAASYDRRII VEQGIPAREI EVSVLGNDEP EASVPGEVIP SGEWYDYAAK YLSGSSQILI PAPITLELAA QVRTLAVQAF KAIDGAGLAR VDFLLNRETG DLYLNEINTM PGFTPVSMYA MMWDASGLPY THLLDRLIDL ALERHAKGRA
|
| |