| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3784 |
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| Symbol | |
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| ID | 5210766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4734456 |
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| End bp | 4735307 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597380 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001278088 |
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| Protein GI | 148657883 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0327167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATA ACGATAACGA TTATCAGCGT ATCCTGCGCA ACCTCGAAGC AGCGGGGCGC
CCTCCGGAAG AACCGGCGCC CGCAGAACAG GCTGAAGCAG CATCGCTGCG CGTGCGTGTT
CCGCTGTTTA CGCCCTGGGC GGCGCGCATC CTGCTGACGA TCAACATTCT TGTCTTCGTT
GGTCCCTGGT TGCTGGACGT GATCGGCATC CGTATTGCCG GCGTCGTGAG TGTGTACGAA
CTGACTCTGA TCTGGGGCGC GAAAGAAAAT GCCGCGATTT CTATCGGCGG GCAGTACTAC
CGTTTTCTGA CCGCAATGTT TCTTCATGGC AGCATTGCGC ACCTGTTCTT CAACTCGTTT
GCGCTCTATT CGCTGGGCTT CGAAGCCGAA CGCATCTTCG GCTCGCAACG CTTCCTGGCG
CTCTACCTGA TTGCCGGTCT GGGCGGCGGA GTGATGTCGT ATGCGTTCAA TCCCAACCCC
TCAGTTGGCG CGTCGGGGGC GATTTTCGGG CTGATTGGCG CGTTGATCGC CTTTTACGTC
GTTGCGCGTT CGGTGCTGGG CGGCATCGCA CGCCAGCAAC TCGGCAGCCT GATATTCGTG
GTGATGATCA ATCTGGCGCT CGGATTTACA TCGCCCTACA TCGACAACAA TGCACATATC
GGCGGGTTGC TGACCGGTGC GGTGATCGGA TGGTTGCTGG CGCCGCGTTT TGCGCTCGAC
CCGCGTTCCT ATCCGCCGAC AGTCGTGCGA TTGGGTCTGC GCGCTGGATG GCCCCTGACA
ATGGCAGTGC TGGCGGTGCT GGTCGTGCTG GCGCTGATCA TCACGCCGCC GCTGCAAACG
CTCTCGCCGT AG
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| Protein sequence | MSDNDNDYQR ILRNLEAAGR PPEEPAPAEQ AEAASLRVRV PLFTPWAARI LLTINILVFV
GPWLLDVIGI RIAGVVSVYE LTLIWGAKEN AAISIGGQYY RFLTAMFLHG SIAHLFFNSF
ALYSLGFEAE RIFGSQRFLA LYLIAGLGGG VMSYAFNPNP SVGASGAIFG LIGALIAFYV
VARSVLGGIA RQQLGSLIFV VMINLALGFT SPYIDNNAHI GGLLTGAVIG WLLAPRFALD
PRSYPPTVVR LGLRAGWPLT MAVLAVLVVL ALIITPPLQT LSP
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