| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3717 |
|---|
| Symbol | |
|---|
| ID | 5210696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4652856 |
|---|
| End bp | 4654982 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640597310 |
|---|
| Product | polyphosphate kinase |
|---|
| Protein accession | YP_001278021 |
|---|
| Protein GI | 148657816 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0855] Polyphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.262385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.013804 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTG TTGCTTTTGA GACGATCGAG AATGATATGG CACTTCTGAG CGCTGCTTCG
CCATACTTCA ATCGTGAGCT CAGCTGGCTC GAATTCAACC GCCGGGTGCT GGAAGAAGCA
ATGGACGAGC GCCATCCGCT GTTGGAGCGC GTGAAGTTCC TTTCGATCTT CAGCACCAAC
CTCGATGAGT TCTTCATGAT CCGTGTCGCG GGCTTGAAGC AACAGATCGC CGCCGGCGTC
GCCAGTCGCT CACCGGACGG GCTGACCCCA TCTGAACAAT TGCACGCCAT TCGCCGCGTC
GTTATTCCGC TTCTTGAGCA GCATCGGTCC TGCTGGCTCG ACGACATCAA GCCGAAGTTG
CATGAGCAGG GCGTTCATGT GTTCGATTAC CACGAACTGA CGCCAGCGCA ACGTGCAGCA
TGCGCCGAAT ACTTTGAGCG TGAGGTGTTT CCGGTTCTGA CGCCGCTGGC CATCGATCCG
GCGCATCCAT TCCCGCATAT CTCAAACCTG AGCCTGAATC TTGCAGTGGT GATCCACGAT
CCGGATGAGG GCGAACTCTT TGCGCGCGTC AAGGTGCCAG CAGTGCTGCC GCGCCTGGTG
CCAATCGAAG GCGGTCTGTG CGATTCTCCG GATGATATTC CACCGGAACG ACGCTACTGC
TTCACCTGGC TCGAACAGAT CATTACCGCC AATGTCGCAT CGCTCTTCCC CGGCGAGGAG
ATCGTCGAAT GCTATCTGTT CCGCATTACG CGCAACGCCG ATATGGAAAT CGAGGAAGAA
GAGGCGGACG ATCTGCTGCG CGTGATCGAA GAAGGGGTGC GTCAGCGACG ATTTGGCGCC
GTTGTGCGTC TGCAGGTGCA GCACTCGATG CCGGAACGGG TGCGCAATCT GTTGCTCACC
AATCTGAAAC TGACCCCCGA CGACGTGTAT GAGATGCGTG GACCGCTCGG TCTGTCGGAT
CTGATGCAGT TGACGAAAAT TGACCGCCCC GACCTGAAAG ATCCGCCGTT CTACCCGATA
CCCCCTGCGC CGTTGCAGAA CGCGCGCAGC AGTGAGGAAC TCTTCGCTGC GATTCGTCAA
CACGATATCC TGTTGCACCA TCCATTTCAC TCCTTCCAGC CGCTGGTATC GCTGATCCAG
GCGGCTGCTG AGGACCCGAA TGTGCTGGCG ATCAAGCAGA CGCTCTACCG CGTCGGGTCG
AATTCGCCAA TCGTGAAGGC GCTTATGCAC GCGCGCGAGC AGGATAAGCA GGTGACCGTG
CTGGTTGAGT TGAAGGCGCG CTTCGACGAG GAGAACAATA TCATCTGGGC GAAACAACTC
GAACGCGCGG GTGTGCACGT CGTGTATGGG TTGGTCGGGC TGAAAACGCA TGCCAAACTG
GCGCTGATCG TTCGCCGCGA GCACGATGGC TTGCGCCGTT ATGTCCACCT CGGCACCGGC
AACTATAATG CAACCACCGC TCGCATCTAT ACCGACCTTG GTCTGTTGAC GGCGCGCCCC
GATATTGCCG CCGATGTATC GGAACTGTTC AACCATCTCA CCGGTTTCTC GCGTCAGCGG
CACTATCGCA AACTGCTCGT CGCGCCGGTG AGCATGCGCG AATGTCTCGA AGCGTTGATC
GAACGCGAGA TCGCCCACGC GCAGGCGGGA CGGCAGGGGC ATCTGATTTT CAAATGCAAC
GCAATCGTCG ATAAAAAGAT TATCGATCTC CTCTATCGGG CTTCTCAGGC AGGCGTAACT
ATTGAGTTGA TCGCGCGCGG CATCTGCTGC CTGCGCCCCG GAGTGCCAGG CTTGAGCGAA
CGCATCTCTG TGCGCAGTAT CGTCGGGCGT TTCCTTGAGC ACAGTCGCAT CTACTACTTT
GCGAACAACG GCAATCCAGA TATCTACCTC GGCAGCGCCG ACCTGATGGA ACGTAACCTC
GACCGCCGCG TCGAGACACT GTTCCCCATC GAGTCTGAGC CTTTGAAAGC GGAGATTCGT
CAACTGCTCG ATGTGTATTT GCGGGATACG TCGCGTGCAC GCATTCTGAT GCCCGATGGT
TCATATGTGC GCGCCCGCCC GCCCGAAGGC GAGGCGCCGT TCGATAGTCA GGCGTTCCTC
AGCCGCGATA ATATGACGCC GCGGTAG
|
|---|
| Protein sequence | MTSVAFETIE NDMALLSAAS PYFNRELSWL EFNRRVLEEA MDERHPLLER VKFLSIFSTN
LDEFFMIRVA GLKQQIAAGV ASRSPDGLTP SEQLHAIRRV VIPLLEQHRS CWLDDIKPKL
HEQGVHVFDY HELTPAQRAA CAEYFEREVF PVLTPLAIDP AHPFPHISNL SLNLAVVIHD
PDEGELFARV KVPAVLPRLV PIEGGLCDSP DDIPPERRYC FTWLEQIITA NVASLFPGEE
IVECYLFRIT RNADMEIEEE EADDLLRVIE EGVRQRRFGA VVRLQVQHSM PERVRNLLLT
NLKLTPDDVY EMRGPLGLSD LMQLTKIDRP DLKDPPFYPI PPAPLQNARS SEELFAAIRQ
HDILLHHPFH SFQPLVSLIQ AAAEDPNVLA IKQTLYRVGS NSPIVKALMH AREQDKQVTV
LVELKARFDE ENNIIWAKQL ERAGVHVVYG LVGLKTHAKL ALIVRREHDG LRRYVHLGTG
NYNATTARIY TDLGLLTARP DIAADVSELF NHLTGFSRQR HYRKLLVAPV SMRECLEALI
EREIAHAQAG RQGHLIFKCN AIVDKKIIDL LYRASQAGVT IELIARGICC LRPGVPGLSE
RISVRSIVGR FLEHSRIYYF ANNGNPDIYL GSADLMERNL DRRVETLFPI ESEPLKAEIR
QLLDVYLRDT SRARILMPDG SYVRARPPEG EAPFDSQAFL SRDNMTPR
|
|---|
| |