Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3577 |
Symbol | |
ID | 5210555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4472847 |
End bp | 4474166 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640597171 |
Product | GTP1/OBG domain-containing protein |
Protein accession | YP_001277883 |
Protein GI | 148657678 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA [TIGR03595] Obg family GTPase CgtA, C-terminal extension |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG ATTTTTACGA TTATGCGCGA ATCTTCGTGC AGGCTGGCGA TGGCGGTGAT GGCGCTGCAA CCTTTCGCCG TGAAAAGTAT GTGCCGCGCG GCGGTCCGGA TGGCGGTGAC GGCGGGCGGG GCGGGCACAT CTATCTGGTC GCCGATCCAG GTCTCAATAC GCTTTTGCCG TTCCGTGAAC GCACGCGCTT CGTGGCGGAA CGCGGCGGCA ATGGTGGACG ATCACGCAAA CACGGGCGCA ACGGGCGCGA TGTTTTCATC CGTGTGCCGG TCGGTACGGT AGCGCGCACG ATCATCGATG GCGAGACGTA CACCGTCGAT CTTGATGCTC CCGGTCTCCA GTTGCTCGCT GCACGCGGCG GGCGCGGCGG TCTGGGGAAT GTTCACTTTG CCACATCGAG TTATCAGGTG CCGCGCATCG CCGAACTTGG CGAACCGGGT GAGCGCCGCG AGATTGAACT GGAACTCAAA CTCCTGGCGG ATGTCGGGTT GGTGGGGTTT CCGAATGCGG GCAAATCGAC GCTCTTGTCG GTGATCAGCG CGGCGCGCCC CAAAATTGCG CCATACCCGT TCACAACCTT GCAGCCGAAC CTGGGGGTTG TCGAGGTTGG AGACTACTCA TTCGTGGTTG CCGACATTCC GGGTCTGATC GAAGGCGCGC ATCGCGGCGT CGGGTTAGGG TTCAGTTTTC TCCGCCACAT TGAGCGCACG CGCCTGCTCA TCCACATTAT CGATGCGGCC GGCGTCGATG GGCGTGATCC GGTCGGCGAC TTCCACGCGA TTAATGAAGA ACTGCGCCTC TATCAGCCCG AACTGGCGCA GCGCCCACAA ATCGTCGCCC TGAACAAGGC TGACCTGCCG GAAGCGCAGG CGAACCTGAG CCGTCTGCGC CATGCTCTTC CGCTGCCCGA CCATGACGTA TTCGTCATTT CAGCGGCAAC GCGCGAAGGT GTGGACGCTC TGTTGCAGCG CGTCGCCGGG CGCCTGAAAG AAATGCCAGC GCCCCACCGC GTACCGCGCG ATGAGACCCT GACCTGGCCC GTGCCCGACG TCGATGAGCG CCAGTACACG ATTGAGCGCA CCTCCGATGG CTGGCGTGTG CGGGGGCGCA AGATCGAGCG CCTGATTTCG ATGACCAACT TTGCCCAACC GGATGCGATC ATGCGCATTC AGCGCGTGCT CGAAGCCAGT GGCATCAGCG CTGCGTTGCA GGAAGCCGGC ATTCAGAATG GAGATACGGT GTATATCGAA AAAGCAGCGT TCGAGTGGGA AGATGGCGAA ATAACCTACC TGATGCCGGG CGTCAGATGA
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Protein sequence | MAGDFYDYAR IFVQAGDGGD GAATFRREKY VPRGGPDGGD GGRGGHIYLV ADPGLNTLLP FRERTRFVAE RGGNGGRSRK HGRNGRDVFI RVPVGTVART IIDGETYTVD LDAPGLQLLA ARGGRGGLGN VHFATSSYQV PRIAELGEPG ERREIELELK LLADVGLVGF PNAGKSTLLS VISAARPKIA PYPFTTLQPN LGVVEVGDYS FVVADIPGLI EGAHRGVGLG FSFLRHIERT RLLIHIIDAA GVDGRDPVGD FHAINEELRL YQPELAQRPQ IVALNKADLP EAQANLSRLR HALPLPDHDV FVISAATREG VDALLQRVAG RLKEMPAPHR VPRDETLTWP VPDVDERQYT IERTSDGWRV RGRKIERLIS MTNFAQPDAI MRIQRVLEAS GISAALQEAG IQNGDTVYIE KAAFEWEDGE ITYLMPGVR
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