Gene RoseRS_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3553 
Symbol 
ID5210531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4450022 
End bp4450678 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content60% 
IMG OID640597148 
Producthypothetical protein 
Protein accessionYP_001277860 
Protein GI148657655 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGG ACCGCGAACT GGAAATCGCT GCTGAGGAGG GAATAATGAC CACACTCGTG 
ATCAAAACCG ACTCGCCGGT CGTCGCCGGT CCGCTCCAGG GACACTGGAC GCTGGCGGAT
TGGGAGGCGC TCCCAAATGA CGGCAACCGC TATGAGATCA TCGATGGAGT GCTCTATATG
ACGACTGCGC CACATAGTTT TCACCAGTGG ATCATTCTCT CGCTGATCCA GTTCGTCGGG
TTGCCAGCGA AGGAACGGGG GCTTGGCTAT ATGTTTATGG CGCCGATCGG CGTCATTATG
CCTGGATGTG ATCCAGTTCA ACCGGACGTA ATCTTCATTC GTGCTGCAAA CGCAGAGATC
ATCCGGAACG GGCGAATCTA CGGCGTTCCC GACCTGATCA TCGAGGTGTT ATCGCCGGGG
ACGCGCGCGT ATGATGAGCG GGTCAAACTG GCGGCATATG CGGCGGCTGG CGTGCCGGAG
TATGCAATGG TAGACCCGGA AACGCGCCAG GTGCGCCGCC ACCTGCTCGA AGCCCCCGGA
CGCTACGCAG CGCCGATCGT CGCCGACGCA ACAGACCAGG TTGCCTTCGC CTGCCTGCCG
GACATTACCT TCCGCGTCGC CGACCTCTTC GCCGGTGCAC CGGATACGAC AATGTAG
 
Protein sequence
MTSDRELEIA AEEGIMTTLV IKTDSPVVAG PLQGHWTLAD WEALPNDGNR YEIIDGVLYM 
TTAPHSFHQW IILSLIQFVG LPAKERGLGY MFMAPIGVIM PGCDPVQPDV IFIRAANAEI
IRNGRIYGVP DLIIEVLSPG TRAYDERVKL AAYAAAGVPE YAMVDPETRQ VRRHLLEAPG
RYAAPIVADA TDQVAFACLP DITFRVADLF AGAPDTTM